Gene Shewmr7_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3381 
Symbol 
ID4257472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3999665 
End bp4000330 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content50% 
IMG OID638124063 
Producthypothetical protein 
Protein accessionYP_739420 
Protein GI114048870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.001985 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCTG CCATGAATGA GTCAAACCAA ACCGTATTAG TCGGCACGGG CGCCATTATC 
GAACTCTTGC TAAAAGGTGA GTTTATTTGC CGCACCACCA ATGAAGATGG CTGGCGCGCA
TTGAAAAATA ACAGTACCCG CGAGCGGGTC GAGGCTTATC TGAACCAAAT CAATCGCACC
GTGGCTTCGG CCGCCGAGGG CGATGTGTTT TTCTGCGGTT ATTTACAGTT AGGCGAAAGC
GAACGCAAGG TGATTTCATC ACAGTTTAAG GATATTTGTC AGGCACTTAT CCCTATGGTG
GAGTGGCTGG TATTAGTGCA GGAAGCCAGC GGCCAAGATG CCCCCTTAAG CGAAGGCGCG
CCAGTACGTT TAACCGAGTT GCAAAGCCGA ATTGAAGATA CGCCCGCGTT TCGTGAGCAG
TTGGCTAAAC TCAGCCAATA CCGCTTATTC GGTTCAACCA GTACCAATAG CGATGCGCAA
ATTAAGTTAG TGTTCAAGCG CTTAGTGGAA CTTGGTTATC TGGTGCGCCC TAACGTGGAA
AAACAAATTT ATATCGCCAC TGGCAAGTTG GATTATCTGT ACGAAGTGAT CCGCTTTATC
GACGAGACCG AAGGCCTAAG CCTAGAGGCG CAGGCGGAAA CGGCGACGCA GCGGGATTTA
CTATGA
 
Protein sequence
MSAAMNESNQ TVLVGTGAII ELLLKGEFIC RTTNEDGWRA LKNNSTRERV EAYLNQINRT 
VASAAEGDVF FCGYLQLGES ERKVISSQFK DICQALIPMV EWLVLVQEAS GQDAPLSEGA
PVRLTELQSR IEDTPAFREQ LAKLSQYRLF GSTSTNSDAQ IKLVFKRLVE LGYLVRPNVE
KQIYIATGKL DYLYEVIRFI DETEGLSLEA QAETATQRDL L