Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3381 |
Symbol | |
ID | 4257472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3999665 |
End bp | 4000330 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124063 |
Product | hypothetical protein |
Protein accession | YP_739420 |
Protein GI | 114048870 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.001985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGCTG CCATGAATGA GTCAAACCAA ACCGTATTAG TCGGCACGGG CGCCATTATC GAACTCTTGC TAAAAGGTGA GTTTATTTGC CGCACCACCA ATGAAGATGG CTGGCGCGCA TTGAAAAATA ACAGTACCCG CGAGCGGGTC GAGGCTTATC TGAACCAAAT CAATCGCACC GTGGCTTCGG CCGCCGAGGG CGATGTGTTT TTCTGCGGTT ATTTACAGTT AGGCGAAAGC GAACGCAAGG TGATTTCATC ACAGTTTAAG GATATTTGTC AGGCACTTAT CCCTATGGTG GAGTGGCTGG TATTAGTGCA GGAAGCCAGC GGCCAAGATG CCCCCTTAAG CGAAGGCGCG CCAGTACGTT TAACCGAGTT GCAAAGCCGA ATTGAAGATA CGCCCGCGTT TCGTGAGCAG TTGGCTAAAC TCAGCCAATA CCGCTTATTC GGTTCAACCA GTACCAATAG CGATGCGCAA ATTAAGTTAG TGTTCAAGCG CTTAGTGGAA CTTGGTTATC TGGTGCGCCC TAACGTGGAA AAACAAATTT ATATCGCCAC TGGCAAGTTG GATTATCTGT ACGAAGTGAT CCGCTTTATC GACGAGACCG AAGGCCTAAG CCTAGAGGCG CAGGCGGAAA CGGCGACGCA GCGGGATTTA CTATGA
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Protein sequence | MSAAMNESNQ TVLVGTGAII ELLLKGEFIC RTTNEDGWRA LKNNSTRERV EAYLNQINRT VASAAEGDVF FCGYLQLGES ERKVISSQFK DICQALIPMV EWLVLVQEAS GQDAPLSEGA PVRLTELQSR IEDTPAFREQ LAKLSQYRLF GSTSTNSDAQ IKLVFKRLVE LGYLVRPNVE KQIYIATGKL DYLYEVIRFI DETEGLSLEA QAETATQRDL L
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