Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3378 |
Symbol | |
ID | 4257469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3995901 |
End bp | 3997151 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124060 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_739417 |
Protein GI | 114048867 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00033988 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTAAAT CACTTTCGAC ACGGATCTTT ATCGGTCTGT TTGCGGGACT TATTCTCGGC ACTTTAGTGC AGTATTTCTT AAACGATTTT GGCTTCTTTT CTGGCAATTT AGTCGAACTG GCTGGCGGCG TCGGCACTAT GTTCGTCAAT ATGATCATGA TGTTGGTCGT GCCTCTGGTG TTTGTCAGTA TCGTTTGCGG CGTGTGTGAG CTGCAGGACT TAAAAAGCTT TGGGCGCCTT GGCGGCAAAA CCTTCGGCTT TTACATCGTT AATACCGTGG TCGCTATCTC AACCGCCCTA TTAGTCGTAT TACTGCTCGA CCCAGGTAAA GGCGTCGATA TGAGCAGCAC TGATGGGGTG GCGATTACCG CGACTGAACT TCCCAGCTTA ATGGCGCTGC TGATTGATAT AGTGCCGCGC AACCCGGTAG CGGCTTTTAT GTCGGGCAAT ATGCTGCAAG TGATCTTTAT GGCACTGATG CTGGGCGGGG TGATTAAATC CCTTGGCGAG CATGTGGCTG GCGCGGTACA AGGTTTTCAA ACCGCCAATA AAATCATGAT GAAACTGATT TCTGTGGTGA TGAGCCTCGC ACCTTATGGC GTGTTTGCGC TGATGTTTAA GTTAGGCGCC ACCTTAGATG CGGCAGTATT TATGAGTGTG CTCGAATACG TCATGATCAT TCTGGCGCTG CTATTACTGT GGATTTTTGT GGTCTATCCG CTGGCGGTGG GGTTCTTTAC ACCGATTTCG GCCAAGAGCT TTCGCGAGAA AACCCAAGAG CAAGTGCTGT TTTCCCTGTC TACCGCCAGT TCTAATGCCA CGATTCCTGT GACCATGCGC ACCCTAACGG AAAAGCTTGG GGTTAATCGC GCCGTGGCAG GTTTTGGTGT GCCGCTCGGG GCGACCATGA ACATGGGCGG CGTGGCGATT TATATCACGA TTGCGATTTT CTTTGTCGCC AATGCCTTCG GTATGCCAAT CACCAGCGAA CAATTGCCAT CGCTGCTGTT TAGTATCTTC CTGTTATCCG TTGGTGCGGG TGGTGTGCCC GGTGGCGGCA TGGTGATGAT TGGGGTATTA ATCCATCAAA TGGGCTTGCC GATTGAAGCC TTTGCGATTG TGGCCGCACT GGACCGCATC ATCGACATGG TGCTGACCTC CTGCAACGTG GTGGGGGATA CGGCGGTGTT GACCATAGTC GACCAAACCG AAAAGACCCA TCAAGTCGAG CTAGTCGATA GCGAGTCTTA A
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Protein sequence | MIKSLSTRIF IGLFAGLILG TLVQYFLNDF GFFSGNLVEL AGGVGTMFVN MIMMLVVPLV FVSIVCGVCE LQDLKSFGRL GGKTFGFYIV NTVVAISTAL LVVLLLDPGK GVDMSSTDGV AITATELPSL MALLIDIVPR NPVAAFMSGN MLQVIFMALM LGGVIKSLGE HVAGAVQGFQ TANKIMMKLI SVVMSLAPYG VFALMFKLGA TLDAAVFMSV LEYVMIILAL LLLWIFVVYP LAVGFFTPIS AKSFREKTQE QVLFSLSTAS SNATIPVTMR TLTEKLGVNR AVAGFGVPLG ATMNMGGVAI YITIAIFFVA NAFGMPITSE QLPSLLFSIF LLSVGAGGVP GGGMVMIGVL IHQMGLPIEA FAIVAALDRI IDMVLTSCNV VGDTAVLTIV DQTEKTHQVE LVDSES
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