| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3360 |
|---|
| Symbol | |
|---|
| ID | 4255315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3973212 |
|---|
| End bp | 3973760 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638124042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739399 |
|---|
| Protein GI | 114048849 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.02442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATC TTAACCTTGC TTTAGCTCTC ACCGCCCTTT CCCTCACCCA ATGCACTAGC
CTCTCACTCG AAGAATGCCG AGATAATGAT TGGTATACCA CAGGCTTAGC CGATGGCAAT
CGAGGCGCCA ACGCGAGTCT GCTCAATCAA TATCAGCAGG ATTGTCATGA GTTTAACCTC
AAGGTGGACG CAGCCCAATG GCAACAAGGG TACCAACAGG GGCTTATCAG CTATTGTCTG
CCCGAAAATG GCTACCGCGT GGGCTTAGCA GGGGAAAATT ACTCTGGCGT TTGTAGCAAT
AATCAGTTTG TTGAGCGTTA TAACCAAGGA CACGAGCAAT ATTTGGTGAA TAAACGTCTG
GCCGAAATTG CCGACCGCTT AAATGCTATC GATATCCAGC TCAGTAGTAT CAACAACAAG
CTGAACAATC TCACCGATAA AGCCGATCTG CTGCGGCAGA AGAACATCCT ATTGAACGAG
AAAAACCATC TCCTCGACGA AAGACTCAGA TTGCGTCAAG GCGATATCCG CTTTGAGTTT
CGCTTCTAA
|
|---|
| Protein sequence | MRYLNLALAL TALSLTQCTS LSLEECRDND WYTTGLADGN RGANASLLNQ YQQDCHEFNL
KVDAAQWQQG YQQGLISYCL PENGYRVGLA GENYSGVCSN NQFVERYNQG HEQYLVNKRL
AEIADRLNAI DIQLSSINNK LNNLTDKADL LRQKNILLNE KNHLLDERLR LRQGDIRFEF
RF
|
|---|
| |