| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3355 |
|---|
| Symbol | |
|---|
| ID | 4255310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3968165 |
|---|
| End bp | 3968992 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124037 |
|---|
| Product | molybdate ABC transporter periplasmic molybdate-binding protein |
|---|
| Protein accession | YP_739394 |
|---|
| Protein GI | 114048844 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0725] ABC-type molybdate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00790663 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0654899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC AGGGTTTAGT GTTAGCAATC AGTTTAGGGG CAACATTGAT GGCGGGAATG
GTACAAGGTG CGCCAATGAA CACTGCAGCG ACAGCCCCTA TTGAACTGAG GGCCGCAGGC
AGTTTAAAGG CGGCGATGAA CGATATTATT GCCGCCTATC AAGCGAAATC CGACGCTAAA
GTCGCGGCGC AATATGCGCC TTCGGGCTTA TTACTTAAGC GGATCCAAGA GGGTGAGCGA
GTGGATATCT TCGCTTCGGC GAATATGAAA CACCCGCAGG CCTTAGTCGA TGCGGGAGCG
GGTCAACAGG TGCAAATGTT TGCCCGTAAC CAGCTCTGTG CCATTGCCCA GGTGGATGTA
CCACTCACCA GTGCGAACTT ATTAGACACC CTGCTCGCGC CGCAAATTAA GCTTGGTACG
TCAACGCCAA AAGCGGATCC CGCGGGGGAT TATGCTTGGG CCGTGTTTGC GAAAGCCGAG
GCCTTAAAAG CCAATGCAAA AACCACATTA GAAACCAAAG CCTTGCAGCT AACGGGTGGG
CCAGAGAGTG CTAAACCGCC CAAAGATCGC AATCCCTATG CTTGGGTGAT GGAAAATAAG
CAGGCGGACG TGTTCTTAAC CTATTGCACC AATGCGGTGC TGGCACAAAA AGAAGTGCCG
AGCCTCAAGA TTGTCGATTT ACCGCCAGAG TTAGCCGTTG GCGCCGACTA TGGCCTATTG
GTGTTAAAGG ATGCCAATAG TGCGGCCGCG CCTCTGGCCG AGTTTATTTT ATCCCCTGAG
GGACAAGCGA TTTTAACGGG CTATGGCTTT CAGCCACCTA AAAAATAG
|
|---|
| Protein sequence | MAKQGLVLAI SLGATLMAGM VQGAPMNTAA TAPIELRAAG SLKAAMNDII AAYQAKSDAK
VAAQYAPSGL LLKRIQEGER VDIFASANMK HPQALVDAGA GQQVQMFARN QLCAIAQVDV
PLTSANLLDT LLAPQIKLGT STPKADPAGD YAWAVFAKAE ALKANAKTTL ETKALQLTGG
PESAKPPKDR NPYAWVMENK QADVFLTYCT NAVLAQKEVP SLKIVDLPPE LAVGADYGLL
VLKDANSAAA PLAEFILSPE GQAILTGYGF QPPKK
|
|---|
| |