Gene Shewmr7_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3346 
Symbol 
ID4255759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3961197 
End bp3961757 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content46% 
IMG OID638124028 
Producthypothetical protein 
Protein accessionYP_739385 
Protein GI114048835 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0369087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.248011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG TGACCCTCGC CATTATCGCC TTTTTTGGCA CTGCACTGGT GCTATATTGG 
CAAGTGCAGC AAAAACGCGG TGGCGATACG GATGACAGCT TGAATGTCAG TGACAGACCC
GATTACATTA TCGAAGATCT GCGCAGCATT GAGTTTAATG AGCAAGGGCA AGTTAACAGT
CGCGTCACGG CAAAGCACAT GGAACACTAT GAGCTGAAAA ACCAAACCGA CTTTACAGCT
CCCGTCTATC TTGTCTATCC CGACCAAGGT AAAGCAAAAT GGCAGATCCG AGCCGACCAA
GGTCGACTCA ACAAAGATAC CGGCAAGGTT GTATTAGAAA ATAATGTTAT TATCGATGCC
ATCAGCCCTG GTGAACCCAT ACAGACACTG TCCACCAGTT TTTTAGAACT CGATCTCAAC
ACTATGATAA TGACCTCTGA CCGCATCATT TACGTCACAG GGAAAGATTT TAATATTCAA
GGGCAAGGCC TTTATGCCGA CCTTAACGCG CAGGAAGTGA AATTGACCAG TCAGGTAGTA
GGAACCTATG AAGCAAAATA A
 
Protein sequence
MSRVTLAIIA FFGTALVLYW QVQQKRGGDT DDSLNVSDRP DYIIEDLRSI EFNEQGQVNS 
RVTAKHMEHY ELKNQTDFTA PVYLVYPDQG KAKWQIRADQ GRLNKDTGKV VLENNVIIDA
ISPGEPIQTL STSFLELDLN TMIMTSDRII YVTGKDFNIQ GQGLYADLNA QEVKLTSQVV
GTYEAK