Gene Shewmr7_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3341 
Symbol 
ID4255754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3956984 
End bp3957457 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID638124023 
Producthypothetical protein 
Protein accessionYP_739380 
Protein GI114048830 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.480692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACAC GAAAAATTGA ATTATTAGTG GGTGTGTTTC TCTTAGCGGG CTTAGCCGCC 
TTTTTGGTAT TGGTGTTTAA AGTCGCCAAC ATCGAAGTCC AGACCAGCGA CAGCAGTTAT
ACCCTCACTG CCAACTTCAC CAATATCGGT GGCTTGAAGG TACGCTCGCC GGTCAAGGTC
GGCGGCGTAG TGGTTGGCCG CGTGAGTAAG ATTGACTTAG ACCCAGTCAA ACTGGTGGCT
GTGGTCACCA TTGTGATGGA TAAACGTTAC GATAAATTCC CTGAAACCAG TAGCTTAGCT
ATTTTAACTT CAGGTTTACT CGGTGAGCAG TTCCTCGGAT TAACACCGGG CTTTGTCGAT
GATGACGTGA GTATGCTTAA AGATGGCGAC AAGATTGACG ATACTCGCTC CGCATTAGTG
TTAGAAGATC TGATTGGTCA GTTCTTATAT AGTATGGGTT CAAAGGATAA ATAG
 
Protein sequence
MLTRKIELLV GVFLLAGLAA FLVLVFKVAN IEVQTSDSSY TLTANFTNIG GLKVRSPVKV 
GGVVVGRVSK IDLDPVKLVA VVTIVMDKRY DKFPETSSLA ILTSGLLGEQ FLGLTPGFVD
DDVSMLKDGD KIDDTRSALV LEDLIGQFLY SMGSKDK