Gene Shewmr7_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3332 
Symbol 
ID4255745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3947672 
End bp3948403 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID638124014 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_739371 
Protein GI114048821 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000119246 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.831105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTC CAAGAATTTA TCAACCTCAA CCATTAGCCG TAAATCAACA GCTGAATTTA 
GATGAGGATG GCGCAGCCCA TATTGGCAAA GTGTTGCGTA TGGGCAGTGG CGAACACATT
AGCCTGTTTA ATGGCAATGG TAATGATTAT CTTGCTGAAA TTGTCGATGC GGGTAAAAAA
TCGGTCACGG TAAAAGTGCT GTCCTGTGAG GCTAATCCAT CGGAGTCGCC CCTCAACCTG
CATTTAGGCC AAGTGATTTC CCGTGGCGAT CGGATGGAGT TCACCATTCA AAAATCCGTT
GAGCTAGGGG TGAATACCAT TACGCCACTG TTTTCTGACC GCTGTGGCGT CAAGCTCACT
GGTGAGCGTC TCGAAAAGAA AATCCAGCAG TGGCAAAAGA TTGTGATCAG CGCCTGTGAG
CAATCTGGCC GTAGCCAAGT GCCCATCGTT CGCCCCGCCA TGGAGTTACA GGAATGGTGC
AGCGAACCGA CCAGTGCACT CAAACTCAAC TTGCACCCAA GGGCGGCGCA CGGTATCAAT
GGGTTAGACT TATCCCATAC CCGTGTACGC CTGCTGATCG GCCCCGAAGG GGGATTATCG
GCGGAAGAAA TCGCCATGAC AGAAACCTAC CAGTTTACCG ATGTGTTACT CGGCCCCCGA
GTGCTGCGCA CCGAAACCGC CTCGCTCACG GCGATTACCG CGCTGCAACT TAGATTCGGT
GACTTAGGTT AA
 
Protein sequence
MRVPRIYQPQ PLAVNQQLNL DEDGAAHIGK VLRMGSGEHI SLFNGNGNDY LAEIVDAGKK 
SVTVKVLSCE ANPSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLT
GERLEKKIQQ WQKIVISACE QSGRSQVPIV RPAMELQEWC SEPTSALKLN LHPRAAHGIN
GLDLSHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG
DLG