| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3325 |
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| Symbol | |
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| ID | 4255194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3936143 |
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| End bp | 3937591 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638124007 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_739364 |
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| Protein GI | 114048814 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.662914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGCA GATTCTGGGT TTTATTCTTC TGTTTATGCT CACCTTTATG TGTCAATGCC
GAGCGCTTGG CCTCATACCT CAATGCTGCA GACGATCTCA GCAGTGCCAC CCAATTAATT
CGTTATTGCG TCGATCCCGA TTGGTTACCC TATGAAGCGA TTCGTGATGG TCAACATGTT
GGGATTTCGT CGGATTATAT TCGTTACATC GAATCCCATT CATCGTTAAA GTTTAGTCTG
GTACCTACCA CCTCTTGGAC ACAAACCTTA GATTTTCTGC AAACGGGACG CTGCAATTTA
ACTCCGCTAT TAAATAAGAC TGTGAGTCGG GAGCAGTTTT TGCATTTTAG CCATGTGTAT
TTTCGTTCCC CCAATGTATT GGTCTCTCTC AAGGACCAGC CCTTTTTGCA AGGGTTTGAA
AACATCGGTC CGCGCACCTT GGCGGTGCCT GATGGCTATC GTCTCGCCGA ATATATTCAG
CATTACTATC CCAAGGTTCG CACCATTAAA GTGGCGAATG AACCTGCGGG ACTTGAGGCT
GTGCTTGAGA AAAAAGTCGA TCTCTTTGTT GGGTCGATGT TTTCCGTCAA TGCCTATATT
CAGCAGACGG GATTCAATCA CCTAAAAATT GCCGGTTGGG GTGGTCCCGA GGATGAACTA
CGGGTCGGAG TGAGCGCAGG GCATGAGGCA CTGCTGCCGT TAATCAATAA AGTGCTAGAT
AATATCGATG AGCTTGAGCG AATAAGGATT TACCAGAAAT GGAACAACAT CACCATTATC
GATGAAACCA ACTACTTACT TATCTATCAA GTGATTGCGG CGACGCTGCT AGTGGTATGC
CTACTGGTAA CGCGCACTTA TATGATCAGC CGTTACAATC GCCGACTAAC CGATAAAAAC
CAGCAGCTTG AGGAGTTACG TCTGCAATTA GAGCAAAGTA ATGCCGAGCT TGAGTTTTTA
TCCACCCATG ATCCGCTCAC TAAACTCTAC AATCGGCATT ACTTTAATCG ACAATTTGTC
CACGATCATC GCGCCGCAAC TTCCACGCAA GGGGCCATTT GCCTTGTGAT GTTAGATATC
GATTTTTTTA AAGAGATCAA TGACACCTTA GGGCATGCCG TTGGGGATAC TATTTTGATG
GAGTTGTCCT CTGTGTTGCA GCATTGTGTG CGTGAAAGCG ATGTGGTTGC GCGTTGGGGC
GGGGAAGAGT TTGTGATCCT CTGCCATAAC ACCTCGCTCG AGGCCGTTAA GTCTCTGTGT
CAGCGGATTG CAACAGCCAT CAAAGATAAC CATTTCAGTG GTGATGTGCG CCTGACTTGT
AGTTTTGGGA TTGCCAAACT CGCTGCAAAT GAGCCGATGC AATCTTGCTT CGAACGGGCA
GATAAGGCGC TATATCAGGC AAAAGCACAG GGGCGGGACC AGATTTGTGT CGGTGAAACT
CACCTTTAA
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| Protein sequence | MGCRFWVLFF CLCSPLCVNA ERLASYLNAA DDLSSATQLI RYCVDPDWLP YEAIRDGQHV
GISSDYIRYI ESHSSLKFSL VPTTSWTQTL DFLQTGRCNL TPLLNKTVSR EQFLHFSHVY
FRSPNVLVSL KDQPFLQGFE NIGPRTLAVP DGYRLAEYIQ HYYPKVRTIK VANEPAGLEA
VLEKKVDLFV GSMFSVNAYI QQTGFNHLKI AGWGGPEDEL RVGVSAGHEA LLPLINKVLD
NIDELERIRI YQKWNNITII DETNYLLIYQ VIAATLLVVC LLVTRTYMIS RYNRRLTDKN
QQLEELRLQL EQSNAELEFL STHDPLTKLY NRHYFNRQFV HDHRAATSTQ GAICLVMLDI
DFFKEINDTL GHAVGDTILM ELSSVLQHCV RESDVVARWG GEEFVILCHN TSLEAVKSLC
QRIATAIKDN HFSGDVRLTC SFGIAKLAAN EPMQSCFERA DKALYQAKAQ GRDQICVGET
HL
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