Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3320 |
Symbol | napH |
ID | 4255189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3930673 |
End bp | 3931656 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124002 |
Product | quinol dehydrogenase membrane component |
Protein accession | YP_739359 |
Protein GI | 114048809 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | [TIGR02163] ferredoxin-type protein, NapH/MauN family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.159981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACA AGTCTATGAA TAACCAGACC ATGAACTCAA AAGCCCGCAT GCAAGGCGAG CATGCCGCAG CCATTGCAGA ACTCGGTTGG TTTGGCGCAC ACAAATATTT GCTACTACGC CGCGCGGTGC AATTCGGCTT ATTAGGCTTA TTTGTACTTG GGCCATTACT GGGAATTTGG CTATTTAAGG GTAATTTATC GGCAAGTTTA CTGTTCGATA CCATTCCCTT GGCCGATCCA CTCGTGAGCT TACAAATGCT CATTAGCGGG CATATTCCCG AGCTTAGCCT ATTGATAGGT GCCGCCTTGG TCATACTGTT TTATGCCCTC GCCGGTGGCC GGGTGTTTTG CAGTTGGGTG TGTCCGGTCA ATCTGGTAAC TGACACAGCA AGCTGGCTCA GACGTAAATT GAACCTTCCT CGCACCAGCG AGTTACCACG CAATTTACGT TATTACCTAC TGGCACTCGT GCTGTTATTG CCACTGCTCA CGGGCAACTT GATTTGGGAG TGGGTTAACC CAGTTCCCTT AGTCTATCGC GCCGTGTTAT TTGGCAGTCT CAGTGGTTTA TGGATCTTAG CGGCGATATT TATGCTGGAT CTGTTTATCG CCGAGCGCGC TTGGTGTGGT CACCTGTGTC CAACAGGCGC CCTATTTGGC TTAATCGGCA AATGGAGCCC CATCAAAATC GTTGCCAGCA AAGCCAGTGC CTGTGATAAC TGCATGGATT GCTTTGCCGT TTGCCCTGAA CGCCAAGTAT TAAAGCCGGC GTTAAAAGGG CAAAACCCGG TGATCACTAG CCCAGACTGC ACCCAATGCG GCCGCTGTAT CGATGTCTGC GCACAACGCG TATTTCGCTA TCAAACACGC TTTACGGCCA CTCAGGCTCA ACTTAGTAAA GGCGATTCGA CCGATTGTCA GTCGCCATCA ACCACTTCAC CAATTCGTCA ACACATTGCC CCCAAGGCGG AGAATGACCA ATGA
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Protein sequence | MSNKSMNNQT MNSKARMQGE HAAAIAELGW FGAHKYLLLR RAVQFGLLGL FVLGPLLGIW LFKGNLSASL LFDTIPLADP LVSLQMLISG HIPELSLLIG AALVILFYAL AGGRVFCSWV CPVNLVTDTA SWLRRKLNLP RTSELPRNLR YYLLALVLLL PLLTGNLIWE WVNPVPLVYR AVLFGSLSGL WILAAIFMLD LFIAERAWCG HLCPTGALFG LIGKWSPIKI VASKASACDN CMDCFAVCPE RQVLKPALKG QNPVITSPDC TQCGRCIDVC AQRVFRYQTR FTATQAQLSK GDSTDCQSPS TTSPIRQHIA PKAENDQ
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