| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3314 |
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| Symbol | |
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| ID | 4255183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3924304 |
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| End bp | 3924702 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123996 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_739353 |
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| Protein GI | 114048803 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.424514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACTGA GTGAGAAACA ACAAGGCTTT ACCATGACCG AAGTGCTGAT TTCGTTAGTG
GTTTCGGTCA CTTCGCTACT GGCGCTCGGC AAAGCGCAGC TATCTTCATT GCAGCATGCG
ACCAATAGCT TCCAGTATAC GGTCGCCACC ATTCAAGCGC AGAATGCCAT TGAAAGGATC
TGGCCGAGGA TCTGCGATAT TCAGCGCCAA CCCGCACGCT TTGAGGATGT CAATTTTAGG
GCCAGCCTCA GCCAAAATAT GCCTAGCGGT TACACCTTAG TGCTACCCAA CACTTATCAA
GACACTATGC CCATCACAGT TACTTGGCAG GACGGCCGCA TTGAGGACAA TAACAGTGTT
AGCCTCAACG CCAGCTTTCC GCACTTATGC CAGGTGTAG
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| Protein sequence | MVLSEKQQGF TMTEVLISLV VSVTSLLALG KAQLSSLQHA TNSFQYTVAT IQAQNAIERI
WPRICDIQRQ PARFEDVNFR ASLSQNMPSG YTLVLPNTYQ DTMPITVTWQ DGRIEDNNSV
SLNASFPHLC QV
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