Gene Shewmr7_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3311 
Symbol 
ID4255406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3922030 
End bp3923280 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content50% 
IMG OID638123993 
Producthypothetical protein 
Protein accessionYP_739350 
Protein GI114048800 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC GCGTACCTCA AACCAAGGCT TGGCACCTTA ATCAATTAGC GTCTGCAACG 
CGATTTAAGA TCGGCACAAG CGCAGGCTTT ATTTTGAAGA GTGTCATAGG AGGCTTACTG
CTTGCGACAA TAAGCGGCTG CGATAACTCG CCTTCAACGA CCGAGCCTCA ATCCATGGGG
ACTTTACTGG GGCAAGCAAG CGCAGATAGC CAAAGCTTTG CCAAGGTGAC GCCAGGAAAC
CACTTTCAAT TTCCTCAAGA TCACCTCGCC CATCAGGATT TTCGTCAGGA ATGGTGGTAT
CTCACAGCTA ATTTAACCAC TGAGAATGGT GAGCAACTTG GCGCCCAATG GACGCAATTT
AGGGTAGCGC TAAAACCTAA GCACACTGAA CCGCAAAACG TGGGAGCGAC GCCTAAGACA
ACTTGGGCGA CGGAGCAGCT TTATTTTGCC CACAGCGCAC TCACCTCCAG CACTTTTCAC
CTCGCCCATG AAAAATGGTC GCGGGCGCAT CGATTACTTG CAGGGGTAAG CGCAGATCCC
TACCAAATTC ACCTCGATAA TTGGCAATGG CGTAGTCAGT CAAATGAGTT GTTCCCTGCA
ACCTTGAGCG TTGCAAACGA CGACTTTAGT TATCAACTCG AGCTTAACAG CCAAGCACCA
CTGCAATATC AAGGGGATAT GGGTTACAGC ATTAAGAGTC GCGACAGCAA AGTCGCCTCT
TACTACTACA GCCAACCCTT TATCACGATT CACGGAGAAA TCACCCGCCA TATCAAGATT
AATGGCCAAG TGGAAAACCG CGTCGAAAAA GTCACAGGTC AAGGCTGGCT AGATAGAGAA
TGGAGCTCGC AGTTTTTAAA TAAGAGCCAG CAGGGCTGGG ATTGGTTTGC TCTTAGGTTA
GATGATGGTT CGGCGCTGAT GCTATTTCAG CTCAGGGAAC AATCCTCCGA TAAAGCGCAA
TCCGCCTTTT ACAGCGCCAG ACGAATGTTT GCCGATGGTA CCGGACGCAA CATCAATTCC
CGCGACACCC CCGATGGGAT AAAAATGACG ACACTCGAGT GGCAAACCAC CAGCACGGGG
AAATACCCCG TTAGCTGGCA AGTGCAAATT CCGAGTGAAC AAATCGACAT TCACATCTCA
CCCTTAAACC CCAATAGTGC CATGGCGTTA TCCACCCAGT ATTGGGAAGG CCCAATTGAG
CTTAAAGGCA GTCATAGCGG CACGGGTTAT ATGGAGCTAA CGGGCTATTA A
 
Protein sequence
MSARVPQTKA WHLNQLASAT RFKIGTSAGF ILKSVIGGLL LATISGCDNS PSTTEPQSMG 
TLLGQASADS QSFAKVTPGN HFQFPQDHLA HQDFRQEWWY LTANLTTENG EQLGAQWTQF
RVALKPKHTE PQNVGATPKT TWATEQLYFA HSALTSSTFH LAHEKWSRAH RLLAGVSADP
YQIHLDNWQW RSQSNELFPA TLSVANDDFS YQLELNSQAP LQYQGDMGYS IKSRDSKVAS
YYYSQPFITI HGEITRHIKI NGQVENRVEK VTGQGWLDRE WSSQFLNKSQ QGWDWFALRL
DDGSALMLFQ LREQSSDKAQ SAFYSARRMF ADGTGRNINS RDTPDGIKMT TLEWQTTSTG
KYPVSWQVQI PSEQIDIHIS PLNPNSAMAL STQYWEGPIE LKGSHSGTGY MELTGY