| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3305 |
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| Symbol | |
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| ID | 4255400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3909150 |
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| End bp | 3910106 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123987 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_739344 |
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| Protein GI | 114048794 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG CAGTTTCGAC ACCCACTTGG GATCTGGACG CCTCAATGCC TCCACTTATG
CTCGCCAACC TATCCCACCT CGGCCTTATC AAAGTGGTCG GCGAACAGGG CCGCAGTTTT
ATGCATGGCC AAGTGACCAC GGATATCAGC TCACTCGAAG CCAATCAATG GCGCTGGGGC
GCCCATTGCG ATCCTAAAGG TAAGATGCTC GCCAGCTTCC GTACCTTTGC TATCCAAGAT
GCGCTGTTGA TGCTGATGCC AAAGGACACC CTAGAGCTAG ACCTGCCGCA ACTGCAAAAA
TATGCGGTAT TTAGTAAGGC AACCCTGACA AATGCGACGG CAGAGTGGAC CTTACTCGGT
GTGGCGGGCG AACAAGCAGT GCCGTTTGTG ACTCAACACT TCGGTGAAAT CACTGAAGAA
CTCACACTGG TTGAACATGG CGCCATCCTA AAGGATGCGG ACCGTTTTAT TCTGGTGCTG
CAGCCAGAAG CGGCAACGGC CTTAGTGGGC GAGCACACAG TCTTTGATGC CAGCGCTTGG
CAAGCGTTAG AAATCACCGC AGGTTACCCT AACCTAGCAC CAAGCCATGC CAATCAGTAT
GTGCCGCAGA TGTGTAATCT ACAGGCGATC AACGGCATTA GCTTTAACAA AGGCTGCTAC
ATGGGCCAAG AAACCGTTGC CCGGATGAAA TACCGTGGTG GTAACAAGCG CGCACTCTAT
ATTCTCCATG GCACCACTTC CTTAAATATC AATTTGGAAA CTGGTATTGA GATTGAGCTA
GAAGACGGTT ATCGCAAAGG CGGACAAATC ATTGAGTTCG TGCAACGCGG CAATCAGGTA
TTGCTCACCG CCGTGCTCGC AAACGATACC CAGAATGATG CCAAACTGCG TTTCGCTGAC
GACGAGCAGT CTAGCTTGCG CATTCAAGCA TTGCCCTACT CGCTCGAAGA TGAATAG
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| Protein sequence | MTIAVSTPTW DLDASMPPLM LANLSHLGLI KVVGEQGRSF MHGQVTTDIS SLEANQWRWG
AHCDPKGKML ASFRTFAIQD ALLMLMPKDT LELDLPQLQK YAVFSKATLT NATAEWTLLG
VAGEQAVPFV TQHFGEITEE LTLVEHGAIL KDADRFILVL QPEAATALVG EHTVFDASAW
QALEITAGYP NLAPSHANQY VPQMCNLQAI NGISFNKGCY MGQETVARMK YRGGNKRALY
ILHGTTSLNI NLETGIEIEL EDGYRKGGQI IEFVQRGNQV LLTAVLANDT QNDAKLRFAD
DEQSSLRIQA LPYSLEDE
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