Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3297 |
Symbol | panC |
ID | 4255393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3900773 |
End bp | 3901618 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123980 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_739337 |
Protein GI | 114048787 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.749755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACTA GCGCCCATAT CGATGATATT CGTACTCAAG TGCGGGCATG GCGTGCCCAG GGCGAGACCG TCGCCTTTGT GCCGACCATG GGCAATCTCC ATCAGGGACA CATCACCTTA GTGAAAGAAG CGGCGAAGAA GTGCGACCAT GTAGTCGTGT CTATCTTCGT TAATCCCATG CAGTTTGGAC AGAACGAAGA TCTCGATGCC TACCCACGCA CCTTAGAGGC CGATAGCCAA GCACTGACCG TCGCGGGCGC CGAGCTGTTG TTCACCCCAA CGCCTGCGAT TATTTATCCT AAAGGCTTGG CGCAGCAAAC CTATGTCGAA GTACCGGGAA TTTCCGATGT ACTCTGCGGC GCTAGTCGTC CCGGTCATTT CCGCGGCGTG GCAACTATCG TCTGCAAACT GTTCAACATA GTGCTGCCCG ATGTCGCTTT CTTTGGTAAT AAGGATTATC AACAACTGTT AGTAATCCGC ACTATGGTTG AAGACTTGTC ACTGCCGATT GAAATTATTG GTGTAGATAC CATTCGTGAA GCCTCGGGCT TAGCCATGAG TTCACGCAAT GGCTACCTGA CAGAGGAAGA AAAAGCCGCC GCGCCGGCGT TGAAAAAAGC CATCGATGCT ATGGCGCAAG GCATCAAACA AGGCGTTAGC ATCGAACAAG TCACAGAGGA AGCCAAAGCG AGCCTTATCG CCGCAGGCTT TACCCCGGAT TACTTAGAAG TTCGCCATGC TACTACCCTG GCGAATGCCG AGCCACAGGA TCAAGCACTA GTTATTTTGG CCGCCGCTTA CTTAGGTAAA GCGCGTCTTA TCGATAATCT GCGCTTCGAC CGCTAA
|
Protein sequence | MITSAHIDDI RTQVRAWRAQ GETVAFVPTM GNLHQGHITL VKEAAKKCDH VVVSIFVNPM QFGQNEDLDA YPRTLEADSQ ALTVAGAELL FTPTPAIIYP KGLAQQTYVE VPGISDVLCG ASRPGHFRGV ATIVCKLFNI VLPDVAFFGN KDYQQLLVIR TMVEDLSLPI EIIGVDTIRE ASGLAMSSRN GYLTEEEKAA APALKKAIDA MAQGIKQGVS IEQVTEEAKA SLIAAGFTPD YLEVRHATTL ANAEPQDQAL VILAAAYLGK ARLIDNLRFD R
|
| |