| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3295 |
|---|
| Symbol | |
|---|
| ID | 4255391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3899382 |
|---|
| End bp | 3899870 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638123978 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_739335 |
|---|
| Protein GI | 114048785 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000217902 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAG TTTTTGTCGC CCTCGGGGCA AATCTTGAAG ATCCCAAAGC TCAATTGGAC
AATGCCGTTG CGGCCTTGTC CGCCTTGGCT GAAAATAAAA GCCTCAAGGT ATCGCCCTAT
TACGGCTCAG CTCCCATGGG AGACGTAGTG CAACCCGACT ATATCAATGC CGTTGCCAGC
TTTGAGACAA CACTGGCACC CATCGCTCTG TTGGATGCAC TGCAAGAGAT TGAAAATACT
CAGGGCCGCG TCCGTAAAGA GCGTTGGGGC CCCAGAACCT TAGATCTCGA CTTACTCTTA
TATGGCGACG AAATCATCGA TAAACCCAGA CTCAAAGTGC CGCACTATGG CATGAAGGAG
CGTAGTTTTG TGCTAGTGCC CTTGGCAGCC ATTGCACCCG ATTTAGTGTT GCCCTGTAAA
ACGCCGCTAC GCAGCCTTAT CAGTGAAAAA TTCTTGGCCG AGTTACAACT ACTGGGCAAT
GATCATTGA
|
|---|
| Protein sequence | MTQVFVALGA NLEDPKAQLD NAVAALSALA ENKSLKVSPY YGSAPMGDVV QPDYINAVAS
FETTLAPIAL LDALQEIENT QGRVRKERWG PRTLDLDLLL YGDEIIDKPR LKVPHYGMKE
RSFVLVPLAA IAPDLVLPCK TPLRSLISEK FLAELQLLGN DH
|
|---|
| |