Gene Shewmr7_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3294 
Symbol 
ID4255251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3898075 
End bp3899382 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content52% 
IMG OID638123977 
Productpoly(A) polymerase 
Protein accessionYP_739334 
Protein GI114048784 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000608896 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGGG ACGCGCATTC GATTTCCCGT AAGCAGATCA GCGAAAACGC ACTTAAAGTA 
CTATACCGAT TGAATAAATC AGGTTTTCAA GCCTATTTGG TCGGTGGGGG TGTACGGGAT
TTGCTCCTCG GACTCGAACC GAAAGACTTC GACGTAGTCA CCAATGCAAC CCCGGAAGAA
ATTAAAAAGT TATTCCGCAA TTGCCGTGTG GTGGGTCGCC GTTTCCGCCT CGCCCATATT
GTGTTTGGCC GCGATGTGAT TGAAGTGGCC ACCTTCCGTG GCCACCATGG CGACAGCAAT
GAAAAGATTT CCAAAGCCAA TGCCGAAGGG CGTTTGCTCA GGGATAACGT GTATGGCGAA
ATCGATGAAG ACGCAGAGCG CCGCGATTTT ACCGTTAACG CCCTTTACTA CGATATCAGC
GACTACTCTA TCCGCAGCTA TGGCGGCGGT ATGGATGATC TTAAGGCGGG AACCTTAAGG
CTGATTGGCG ATCCCGAAAC CCGTTACCGT GAAGATCCGG TACGTATGCT CAGAGCCGTG
CGTTTTGCCA CTAAGCTCAG CATGACTATC GATGAAGTGA CCGCTAAACC TATCAAACAA
TTAGCACCGC TGCTCAAAGA CATTCCTGCC GCCCGCATGT ATGAAGAAGT ACTGAAACTC
TTCTTCGCCG GTAAGGCCAT GGCCAACTTT GAGATGATGC AGGAATATAA GCTATTCGCA
CCGCTCTTCC CGCAAGTCGA TGCCCAATTA AAAGATGCGC CTAAGGGCCC TGCGATGAAG
ATGGTGCAAG CCATCATGAA GAGCACGGAC GCGCGCGTGA ACGAAGATAA ACCTGTTACC
CCGTCTTTCT TCTATGCGGC GATCCTCTGG TATCCCCTGC GCCAACGCGC CGAAGATATC
GCGGTCGAGA GCGGCCTGAC CTTATACGAT GCATTTTTTG CCGCCATGGG TGATGTGATT
GAGCAGCAAT GCCAAACTAT TAGCATTCCA CGCCGTTTCA GCACTCCAGC CAAAGACATT
TGGCAATTGC AGTTACGCTT CGATCGCAGC CAAGGCACGC GCGCCTTTAA ACTGTTAGAG
CATCCTAAAT TTAGAGCCGC CTACGACTTA CTGTTACTGC GCGGCGAAGT CGAAGGTGGC
AATGTCGCTA AGAGTGCGGC ATGGTGGCAA CAGTTTGTTG AAGCAGATGA AACCGAACGT
TTAGCCATTG CCCGCAGTGG TAACAAAGCC TCGGGCAATC GTAACCGTAA CGCTCCACAG
CGCCGTCGCC GCCGCCCAAG TGCCGCGAAA GCCAAAGCCG AAGAATAA
 
Protein sequence
MPRDAHSISR KQISENALKV LYRLNKSGFQ AYLVGGGVRD LLLGLEPKDF DVVTNATPEE 
IKKLFRNCRV VGRRFRLAHI VFGRDVIEVA TFRGHHGDSN EKISKANAEG RLLRDNVYGE
IDEDAERRDF TVNALYYDIS DYSIRSYGGG MDDLKAGTLR LIGDPETRYR EDPVRMLRAV
RFATKLSMTI DEVTAKPIKQ LAPLLKDIPA ARMYEEVLKL FFAGKAMANF EMMQEYKLFA
PLFPQVDAQL KDAPKGPAMK MVQAIMKSTD ARVNEDKPVT PSFFYAAILW YPLRQRAEDI
AVESGLTLYD AFFAAMGDVI EQQCQTISIP RRFSTPAKDI WQLQLRFDRS QGTRAFKLLE
HPKFRAAYDL LLLRGEVEGG NVAKSAAWWQ QFVEADETER LAIARSGNKA SGNRNRNAPQ
RRRRRPSAAK AKAEE