Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3291 |
Symbol | |
ID | 4255248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3895446 |
End bp | 3896150 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123974 |
Product | sugar fermentation stimulation protein A |
Protein accession | YP_739331 |
Protein GI | 114048781 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000125769 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTTA GTCCAGCACT GAAACCGGGA AAGTTACTCA AACGCTACAA ACGTTTTCTC GCCGATGTTC AACTCGAAGA CGGCACTGAA ATCACCCTGC ATTGCCCCAA TACCGGTTCA ATGCGTAACT GCCTGTTCCC CGGTGAAACC GTGTGGTTTT CGACTTCTAA CAATCCTAAA CGTAAATATG CCCATACATG GGAGTTAATG ACCACGCCAA CGGGTGGCCT TATCGGCATT CATTCGGGCA ATGCCAACGC TCTGGTCGAG GAAGCCCTTA ATAAAGGTAT CATCACTGAA CTGACAGGTT ACGACAGCTT AAGTCGCGAG GTGAAGTATG GGGATGAGAA TAGTCGCATC GATATTCTAC TGGAAGCCGC TCAAAAACCC GCCTGTTATA TAGAAGTCAA AAGTTGTACT TTGCTTGAAG ATGGTCAAGG CTATTTCCCC GATGCGGTGA GCCTTCGCGG ACAAAAACAT CTACGGGAAT TAATGCATAT GGCGAGCCTT GGGCACAGAG CCGTATTGCT ATTTGTGGTG CAACACACAG ACATCCACAG CGTGGCCCCC GCGGCACATA TCGACCCGGA ATATGCTAAC TTATTGAAAA AAGCAATCTT ATCTGGCGTA GAAGTGTTAG CCTATCGCTG CGAAATCTCC CCCGATGAGA TACATCTAGC CCAATCGTGT CCAGTCCGAG TATGA
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Protein sequence | MHFSPALKPG KLLKRYKRFL ADVQLEDGTE ITLHCPNTGS MRNCLFPGET VWFSTSNNPK RKYAHTWELM TTPTGGLIGI HSGNANALVE EALNKGIITE LTGYDSLSRE VKYGDENSRI DILLEAAQKP ACYIEVKSCT LLEDGQGYFP DAVSLRGQKH LRELMHMASL GHRAVLLFVV QHTDIHSVAP AAHIDPEYAN LLKKAILSGV EVLAYRCEIS PDEIHLAQSC PVRV
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