| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3284 |
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| Symbol | |
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| ID | 4255241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3888253 |
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| End bp | 3889854 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638123967 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_739324 |
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| Protein GI | 114048774 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAATCA TAGATCCCAT AGTGACAGGC TTAAATTCCG GTTGGTTACA TACCGACGCC
AGTCAACTGC AAGAAAACCA GCAATTTGAA GCCGATGTGG TGATTGTAGG CACGGGCGCA
GGTGGCGGTG TGGCGGCGGA GATCCTCAGC CAAGCTGGAC TCAGTGTGAT CATGATTGAA
GCGGGGCCGC TTAAATCCTC CAGCGACTTT AATATGGAGG AGCGGGTCGC GTACCCTAAT
TTGTATCAAC AGGCGGCCGC GATGAAAACC GCCGATAAGG CGATTGGTAT TTTTCAAGGT
CGCGCCGTGG GCGGCTCAAC CACCATCAAT TGGACCACCT CGATTCGTAC CCCGAAGGAA
GCCTTAGCCT TTTGGGCGCA GCATAAATCC GTTGCGGGCC TCGACCCCGA CGCTCTGGCC
CCTTGGTTCG AGCAGATGGA GCAGCGGCTT AATATTCACG AATGGAATTA TGAACCTAAC
CGCAATAATG GCGCCCTCAA GCAAGGTTGT ATCAACCTAG GTTGGGATTA CACTGTTATT
AAGCGTAACG TGGCGGGCTG CTGGAATACT GGTTATTGCG GCATGGGTTG CCCAGTCAAT
GCTAAGCAGT CGATGTTAGT GACTACGATT CCGACTGCAT TAGAGAAGGG CGCGCAGCTT
TTTAGCCGTG CCAAAGTCGT TAAAATTGAA CACCATAATG GCCAAGTGTT TGCCCTCAAG
GCGCAGGCGC TCGATGTGAA TTTACGGCCG ACGTCGGTCG AGCTGTTATT TAAAGCCAAA
CACTATATTT TAAGTGCTGG CGCTATCCAC ACGCCGACCT TGATGATGAG CTCCGAGGTG
CCCGATCCCT ATCAGCTGTT GGGCAAACGT ACCTTTTTAC ATCCCACAGT GCTCTCGGGT
GGCATCTTTG CCGATGCGAT TAATGCCCAC AGTGGTGCGC CACAATCTAT CTATTCCGAT
GAATTTGTTT GGAAAAACGG TGCCGATGGC GAGTTAGGTT ACAAGCTTGA GGTGCCGCCG
GTGCATCCGA TTTTGATCGC CTCTAAAACC TTAGGTTACG GCGCCAGCCA TGCCGAATTG
ATGGCGCAAT TTAATCAGCT ACAGGTCACT ATCGCCTTGA TCCGCGACGG TTATCATCCC
GATAGCCAAG GTGGGCAAGT GCATCTCACC TCGACGGGCT TTGCCTTGGA TTATCCGCTC
ACCGAGGCCT TTTGGCGTGC GGCGCGGCGG GCGTATGCCA GCATGGCCGA ATTGCAATTC
TCGGCGGGGG CATTAAAAGT GCTGCCCATC AGTGATGGCA TGCCGTATCT GTCGTCATGG
AAGGAGGCGA AAGAGAGCAT TGCGCAAATG GATTTAGCGC CGCTGCGGAC AATCGTCGCC
TCGGCGCACG TGATGGGCGG CTGCCCCTTT GGCGAGGATG AAAAGCTCTC TATGGTCAAT
AGCTATGGTC AGTCACATTA TCTGGATAAT CTGTCGGTGA TGGACGGTTC TATCTTCCCG
ACCAGCCTCG GGGCCAATCC GCAGCTGTCG ATTTATGGCA TTACCGCGCG CAATGCCACA
GCGTTGGCGC AAAAGCTGAC CGATGGCCGA GAGCCGCAAT AG
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| Protein sequence | MAIIDPIVTG LNSGWLHTDA SQLQENQQFE ADVVIVGTGA GGGVAAEILS QAGLSVIMIE
AGPLKSSSDF NMEERVAYPN LYQQAAAMKT ADKAIGIFQG RAVGGSTTIN WTTSIRTPKE
ALAFWAQHKS VAGLDPDALA PWFEQMEQRL NIHEWNYEPN RNNGALKQGC INLGWDYTVI
KRNVAGCWNT GYCGMGCPVN AKQSMLVTTI PTALEKGAQL FSRAKVVKIE HHNGQVFALK
AQALDVNLRP TSVELLFKAK HYILSAGAIH TPTLMMSSEV PDPYQLLGKR TFLHPTVLSG
GIFADAINAH SGAPQSIYSD EFVWKNGADG ELGYKLEVPP VHPILIASKT LGYGASHAEL
MAQFNQLQVT IALIRDGYHP DSQGGQVHLT STGFALDYPL TEAFWRAARR AYASMAELQF
SAGALKVLPI SDGMPYLSSW KEAKESIAQM DLAPLRTIVA SAHVMGGCPF GEDEKLSMVN
SYGQSHYLDN LSVMDGSIFP TSLGANPQLS IYGITARNAT ALAQKLTDGR EPQ
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