| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3282 |
|---|
| Symbol | |
|---|
| ID | 4255239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3887352 |
|---|
| End bp | 3887813 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638123965 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739322 |
|---|
| Protein GI | 114048772 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5589] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02444] conserved hypothetical protein TIGR02444 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATG CAACCCCGTT AGACAGTCAA ATTTGGCATT GGTGTGATAT GAGCTACGGG
CAAAATAAGC AGCTTTGCCT CGAGCTACAG GATAACTGCC AAGTGAATGT GAATCTCTTA
CTGCTGGCGC AGTATTTAGA TCTCACCAGT GATGTAGCGG GCCCGCGGGA ATATTCGACC
GAGCAGTGGC AGCAGCTAGT GAATGCAGTT TGGGATTGGG ATGAAAAGTT TCTCACGCCC
TATCGCCGTC TGCGCCGCCT CGCCAAGGCA AGCCTGAATG AGGAAGAGTA TCAGCAGATG
CTCGATGTTG AGCTGATGAT GGAACGTAAG GCGCAGCGCA CAATTTTAAA TGCCGTCAAT
GGGTTATCGC CAACTGGCGC TCAAACCAAT CTGGTGAGTT ACTTGACCCT GTTTGGCCTA
TCCGCAGCCG ATGTAAATTC GCTGAATTTT ATCGCGCCTT AA
|
|---|
| Protein sequence | MSDATPLDSQ IWHWCDMSYG QNKQLCLELQ DNCQVNVNLL LLAQYLDLTS DVAGPREYST
EQWQQLVNAV WDWDEKFLTP YRRLRRLAKA SLNEEEYQQM LDVELMMERK AQRTILNAVN
GLSPTGAQTN LVSYLTLFGL SAADVNSLNF IAP
|
|---|
| |