| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3269 |
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| Symbol | |
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| ID | 4255139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3873140 |
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| End bp | 3873760 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123952 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_739309 |
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| Protein GI | 114048759 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.616801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA GTTTATCCAT GCGGGACATG CTAGCAGGCC CTGTATTTGC CAATAACCCA
GTGGCGATGC AAGTGCTGGG CGTATGTTCG GCGCTGGCGG TGAGTAACTC CATGCAGACG
GCCGTGGTGA TGACACTGGC GGTGACCTTC GTACTGGTGT TCTCAAACCT TATCATCTCC
GCTATTCGCA ACTTTATCCC TAACAGCGTG CGGATTATTG CCCAGATGAC GGTCATTGCC
TCCTTGGTGA TTATCGTCGA CATGGTGTTG CAGGATGTGG CTTACGAGCT ATCTAAGCAA
CTATCTGTAT TCGTTGGGTT AATCATCACT AACTGTATCA TCATGGGCCG CGCAGAAGCC
TTTGCGATGA AGTATCCACC TCACTTAGCC GTGGTCGATG CCGTGGGTAA CGCGGCGGGT
TATGGCTTGG TGCTGATCAG TGTGGCCTTT GTGCGTGAGC TGTTAGGCAC GGGCAATCTG
TTTGGGCATA GCGTGTTGAC TACGGTTGAA AACGGCGGCT GGTACTTACC CAATGAGATG
TTTAAGTTGC CCCCAAGCGC CTTCTTCCTG ATTGGCCTGC TGATCTGGAG CATTAACGTG
ATCCAGCGTA AACGCGGTTA A
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| Protein sequence | MSNSLSMRDM LAGPVFANNP VAMQVLGVCS ALAVSNSMQT AVVMTLAVTF VLVFSNLIIS
AIRNFIPNSV RIIAQMTVIA SLVIIVDMVL QDVAYELSKQ LSVFVGLIIT NCIIMGRAEA
FAMKYPPHLA VVDAVGNAAG YGLVLISVAF VRELLGTGNL FGHSVLTTVE NGGWYLPNEM
FKLPPSAFFL IGLLIWSINV IQRKRG
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