Gene Shewmr7_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3264 
Symbol 
ID4255134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3867965 
End bp3868504 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID638123947 
ProductNTPase 
Protein accessionYP_739304 
Protein GI114048754 
COG category[S] Function unknown 
COG ID[COG1986] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00258] inosine/xanthosine triphosphatase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAA ACATCATCAA AGTGATCGTC GGTTCGAAAA ACCCCGTCAA AATTAACGCG 
GCGGCCAATG CTATGGCGCT GCTCTTCCCT GAATATGAGA TCCAAACTCA AGGCATGGAT
GCGCCCTCGG GCGTCCCCGC GCAGCCCATG ACAGATAGCG ACACCCGCCA AGGAGCTATC
AACCGTGTCC ACTATTGCCA GCAACAAGTG GAAGCGGATT ATTACTTTGC GATGGAAGGC
GGCGTCGATT GTTTTGAGTT TGGTCCTGCG ACCTTCGCCT ATATTGCGAT TGCCCACCAA
GCCCGCTTGA GCATTGGCCG AGGCGCCTTG TTGCCGCTAC CTATGCAGGT CTATCAGGCA
CTCGAGGCGG GTGAAGAGTT GGGTCATGTG ATGGATAGAC TGTTTAATAC GGTTAACATC
AAACAAAAAG GCGGCGCAAT AGGCCTACTC ACCCACGGCC ACGCCACCCG TGAGAGCAAT
TATACCCAAG CGATCATCCT CGCCATGGCG CCGTTTTTAA ATCCTGAGTT GTACCCTTAA
 
Protein sequence
MQQNIIKVIV GSKNPVKINA AANAMALLFP EYEIQTQGMD APSGVPAQPM TDSDTRQGAI 
NRVHYCQQQV EADYYFAMEG GVDCFEFGPA TFAYIAIAHQ ARLSIGRGAL LPLPMQVYQA
LEAGEELGHV MDRLFNTVNI KQKGGAIGLL THGHATRESN YTQAIILAMA PFLNPELYP