Gene Shewmr7_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3247 
Symbol 
ID4256939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3847991 
End bp3849058 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content50% 
IMG OID638123930 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_739287 
Protein GI114048737 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0347517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAA TTTCCCTACG ACAACTACTC GATCACGCGG CAGAGCATGG ATACGGTGTG 
CCAGCGTTCA ACGTAAACAA CCTTGAGCAA ATGCGCGCCA TCATGCAGGC CGCTGAAGCC
ACAGACAGCC CAGTTATCGT GCAAGCCTCT GCAGGTGCAC GTAAATATGC GCGTCCACAA
TTCTTAAAAT ACCTGATGAC GGCTGCACTT GAGCAGTATC CAGATATCCC AGTCTGTATT
CACCAAGACC ATGGTACCGA TCCTGACATC TGTCAGCGTT CTATCCAATT AGGTATGTCA
TCAGTCATGA TGGACGGTTC ATTAATGGCC GACGGTAAAA CCCCTGCTTC TTACGAGTAC
AACGTTGATG TGACTCGCAG AACTGTAGCA TTCGCCCACG CTTGTGGTGT GTCTGTAGAG
GGCGAAATCG GTTGTTTAGG CAGCTTAGAA ACCGGTACTG CCGGTGAAGA AGACGGTGTG
GGCGCAGAAG GCGTATTAAG CCACGACCAG CTGCTGACCA GCCCAGAAGA AGCGGCACGC
TTCGTTGCCG ACACTCATGT TGACGCGCTA GCGATTGCGA TTGGGACCAG CCACGGTGCA
TACAAGTTCA GCCGTAAACC AACGGGTGAT GTACTGCGTA TCGACCGCAT CAAAGAAATC
CATGCCCGCA TTCCTAACAC TCACTTGGTT ATGCACGGTT CTTCTTCAGT GCCACAGGAA
TGGTTACAGA TCATCAACCA ATACGGTGGT CAAATTCCTG AAACTTACGG CGTGCCATTA
GAAGAAATCG TTGAAGGTAT CAAACACGGC GTGCGTAAAG TGAACATCGA TACCGATTTG
CGCTTAGCAT CTACCGGTGC GGTACGTAAA TACTTGGCCG AACACCCAAG CGAGTTCGAC
CCTCGTAAGT TCCTAAAAGC CTCTATGGAA GCGATGGCAG ACATCTGTAC TGTTCGCTAC
GAAGCTTTCG GTTGTGCGGG TCAAGCTTCT AAGATTAAGC CATTGTCTTT ACAAGCAATG
TACAAGGCTT ATCAGTCAGG TGCTTTAGAT CCTAAAATCA ATCTCTAA
 
Protein sequence
MALISLRQLL DHAAEHGYGV PAFNVNNLEQ MRAIMQAAEA TDSPVIVQAS AGARKYARPQ 
FLKYLMTAAL EQYPDIPVCI HQDHGTDPDI CQRSIQLGMS SVMMDGSLMA DGKTPASYEY
NVDVTRRTVA FAHACGVSVE GEIGCLGSLE TGTAGEEDGV GAEGVLSHDQ LLTSPEEAAR
FVADTHVDAL AIAIGTSHGA YKFSRKPTGD VLRIDRIKEI HARIPNTHLV MHGSSSVPQE
WLQIINQYGG QIPETYGVPL EEIVEGIKHG VRKVNIDTDL RLASTGAVRK YLAEHPSEFD
PRKFLKASME AMADICTVRY EAFGCAGQAS KIKPLSLQAM YKAYQSGALD PKINL