Gene Shewmr7_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3238 
Symbol 
ID4255739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3839337 
End bp3840734 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content49% 
IMG OID638123921 
Producthypothetical protein 
Protein accessionYP_739278 
Protein GI114048728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAAGA TACGTGTCAA ACAAGAAGAA TCCCTGTCGA TTAAGTTCAG CCATCAGATG 
GAAAAGGGCG ATAATCGTCA GCTTGATCTC TATTTCTTTT TACCAAAGGA AATGGGCATA
GGCGCGCACA CTTTAAACGA AGAAGAGTAT TACCACAGCG CGATTGTTGG ACGCCGCTCC
TACTACTCCG AAGGGTTGCA CTTGCCACTG GTGCAAGGGC GTTTCGCCAG TATGAACCGT
CGCACGGTGG AAGAATTCCG GCTTTACTTA AACCTGTTTG CCTACCAGTT TGCCGTTGCG
GTTGAAAACG ATGTCAAAGA ACTCAATCGC ATCGCCGATG TGGCGCACTT CTATCTGGCG
CTCGATGAGC TGTGCGAGCA AGTGACGCAG TTACTGAAAA AGTTTCGCCG TAATGAGCCG
GGCGATCCGA AATGGAAATC CTATTTCGAG AATGCCGATA ACTATCTTTC TTGGTTCTGC
GAACAACAAC TGCTAAAAGT GCTCGCCCAC GCCACGCGCA CCAGTGATTT TGCCGACATC
CAAGAACGAG TATTGACCCT GTGCCGCAAC GAATGTGCTT ACCGCGATGC CAACAACTAT
AACTCGGCGC AGACCAAGCA AGATCCCAAC CGAATTTCGA ATAAGATGCT GTTATTGCGG
CGCTTAATCC AGCAAGGTGT GGTACTCAAA GAAGAGTTAA AACCCTTAGG CATTGGCCTT
AAAAAGTTTA CGACTGGACT TGCGACCGCG TTGGTGATGT TGGTGGTATC GGCGCTGATC
ATCGAGGCGC AGGGCGTCTT TAGTGGCTTT ACCATAGCGT TGGTGCTGAC GCTGGCGGTG
ATTTACGGAT TTCGTGAAAT CTTTAAGGAC GATGTGCGTA ATGCTCTCTG GCGCTTTATT
CAGCGTGGTC GGCCGCGTTG GAGCCGTATC TTAAGGGATA CCACCAGTCA GTCGGTGATC
GCTAAACAAT TAGTTTGGCT CGAATTTATG CGGCAACAGG ATTTGCCTGA AAAGGTTAAC
GAAATTCTAA AACAACGGCA TAGCCAAAAT AAGGTCGATG CCGAAGTCCT GCATTATAAG
ATTGCCACTC GGGTAAACCA TGGCGAGTTT CAGGCGGGAT ATTCGACGAT ACAAGAGCAA
GTGAACTTTA GTTTTGTGCC CTTTGCCCGC TACTTAGAGC GGGGCAAGGC AAAGATTTAT
AAGGAAATTG AGGGCAAGAT CAGCCACGAG TCGGTAGAGC GTCGCTACCA AGTGAATCTA
ATTTTAGTGC TGCGGGATGG CCGTGAAGAA CCTGAATACG CGCGCTACAA AATCACCATG
AACCGCTCGG CCATTATCGA GATCACTCAA AGTCAGTTAC CCGATTCCTT TAATCCGCCC
GCTAAGGCTG ACGAGTAA
 
Protein sequence
MFKIRVKQEE SLSIKFSHQM EKGDNRQLDL YFFLPKEMGI GAHTLNEEEY YHSAIVGRRS 
YYSEGLHLPL VQGRFASMNR RTVEEFRLYL NLFAYQFAVA VENDVKELNR IADVAHFYLA
LDELCEQVTQ LLKKFRRNEP GDPKWKSYFE NADNYLSWFC EQQLLKVLAH ATRTSDFADI
QERVLTLCRN ECAYRDANNY NSAQTKQDPN RISNKMLLLR RLIQQGVVLK EELKPLGIGL
KKFTTGLATA LVMLVVSALI IEAQGVFSGF TIALVLTLAV IYGFREIFKD DVRNALWRFI
QRGRPRWSRI LRDTTSQSVI AKQLVWLEFM RQQDLPEKVN EILKQRHSQN KVDAEVLHYK
IATRVNHGEF QAGYSTIQEQ VNFSFVPFAR YLERGKAKIY KEIEGKISHE SVERRYQVNL
ILVLRDGREE PEYARYKITM NRSAIIEITQ SQLPDSFNPP AKADE