Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3235 |
Symbol | |
ID | 4255736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3832908 |
End bp | 3836111 |
Gene Length | 3204 bp |
Protein Length | 1067 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123918 |
Product | acriflavin resistance protein |
Protein accession | YP_739275 |
Protein GI | 114048725 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.890283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACTC AAAAAGGGAT CTTAGCCTGG TTTGCCCGCA ACAGCGTGGC AGCCAACCTG TTAATGTGGG CGCTACTGAT TGGCGGTCTA TTTAGCACAG TGTTGATTAA TAAAGAGGTT TTCCCCTCTT TTAACCTTAA CTTATTGAGC ATTACCGTTG CTTATCCCGG CGCTGCGCCA CAGGAAATCG AAGAAGGCAT CAACATCAAG ATTGAAGAAG CCATCCAAGA TATCAACGGC ATTAAAAAAG TGACCTCGGT TGCCAGTGAA GGCGTTGGTT CAATCACGGT TGAAGTCGAA GATGACTACG ACGTGCAAAC CGTACTCGAC GAAGCCAAGT TACGATTGGA TGCGATCTCC ACCTTTCCGG TGAACATCGA AAAACCGCAA ATCTATAAAA TCGAACCCGA AAACAACGTG ATTTGGGTGT CGGTTTACGG TGATATGTCG CTGCACGATA TGAAAGAACT GGCCAAATCG GTGCGTGATG ATTTGACCCA ACTCCCCGCC GTGACCCGCG CGAAAGTCAC GGGGGTGCGC GACTATGAAA TCGGTATCGA AGTCTCGGAA GATAAGCTAC GGGAATACGG CTTAACCTTC TCGCAAGTCG CTTTGGCGGT GCAAAACTCT TCTATCGACT TACCGGGCGG TTCGATCCGT GCCGAAGATG GCGACATTCT GCTGCGTACT AAAGGCCAAG CCTATACCGG CGATGATTTT GCCAATATCG TCGTCACGAC CCGCGCCGAT GGTAGCCGAG TGATGTTGCC TCAAGTGGCA ACCATTAAGG ACGATTTTGA AGAACGTTTA GAGTACACCC GCTTCAACGG CAAGCCTGCG GCCATTATTG AAGTGACCAG CGTTAACGAT CAAAACGCCC TCGACATCGC TCAACAGGTC AAAGACTACG TCGAGAAACG CCGTGCCACT CTACCAGCCA ACGCAAAATT AGACACTTGG GGAGATTTAA CCCACTACCT CAAGGGCCGT TTGAACATGA TGATGTCGAA CATGTTTTAT GGCGCCCTGT TAGTGTTTGT GATCTTAGCC CTGTTCCTCG ATCTCAAACT CGCCTTCTGG GTGATGATGG GGTTACCCGT GTGTTTCCTC GGCACTATGC TGATCATGCC GCTGGAACCT TTCTCCATGA CCATCAACAT GTTGACATTG TTCGCCTTTA TTCTCGTTTT GGGGATAGTG GTCGACGATG CGATTGTGAT AGGCGAAAGC GCCTACAGCG AGGTCGAACG GCACGGACAC TCGATTGACA ACGTGATCCG CGGTGCGCAA AAAGTGGCCA TGCCCGCCAC CTTCGGGGTG TTAACCACTA TCGCCGCCTT TATTCCTATG TTGATGGTTT CTGGCCCCAT GGGGATTATT TGGAAATCCA TCGGCATGGT GGTCATCATG TGTCTGGCGT TTTCACTGGT GGAATCTAAA TTTATCCTGC CCGCGCACTT AGCCCACATG AAGTTTAGAA AACCAGGCGA ACCCACAGGA TTCTTTGGTC GCTTTAAGGA TCGATTTAAC AATCGCGTTC AGCATTTTAT TCACCACAGT TACCGTAACT TCCTCGAGCG CTGTATCCAA CATCGCTACA ACGTGGTCGC GGCCTTTATC GGTGTGTTGA TTTTATCCGT CGCCTTAGTC GTCAGCGGTA AAGTGCGCTG GGTATTCTTC CCCGATATTC CATCGGACTT TATCCAAGTG CAATTGGAGA TGGATGAGGG CAGCTCTGAA CAGAACACCC TCAAGGTGGT GCAGGATATA GAAGAAGCCC TGTACAAGAT GAACGCCAAA ATGGAGAAGG ACAACGGCAG CGAAGTGGTG AAGCACAGCT TTATCAACAT GAGCTCACGC ACTTCCGCCT TTATCTTTGC CGAACTCACT AAGGGCGAAG ACCGGGAAGT AGATGGCGAA ACCATTGCCG CCGCGTGGCG CGAGCAATTG CCCGAATTAC TGTCGGTGAA AAAACTCGAC TTTAACGCCA GCGGGAACGG CGGTGGCGGT GGTGACATCT CCTTTAGACT GACCTCGAGC GATCTCGAAG AATTATCCGC AGCCGCACGC GAGCTTAAGC AAAAGCTCGC CACCTACGAA GGTGTGTATG ACATTGCCGA TAACTTCTCC TCGGGCAGCC ATGAGATCCG CTTAAAGATC CGCCCAGAGG CCGAAGCGTT AGGCTTAACC TTGTCTGATT TAGCTCGCCA AGTCCGTTAT GGCTTCTATG GTTATGAAGC ACAACGCATT TTGCGTAATA AAGAAGAAAT CAAAGTCATG GTGCGCTACC CATTAGAACA GCGCCGAACC GTTGGCTACC TCGAGAATAT GCTGATCCGC ACGCCGCAGG GTAAGTCGGT GCCTTTCTCC ACCGTAGCCG AAGTCGAAAA GGGTGAGTCC TATGCCTCTA TCACCCGTGT CGATGGCAAA CGGGCGATTA CCATCATTGC CAATGCCAAC AAACACAAGG TTGAACCTTC TAAGGTAGTA AATGAAATCC AGAAGGATTT CCTGCCGCAG TTACAGGCCA AGTATCCGAA AATCCAAACC ACCCTCGATG GTGGCAGTTT GGATGAACAG AATGCTATGG TCGGTCTCAT GCAAGGCTTC TTCTTTGCGC TGTTTACCAT TTATGCCTTG ATGGCGGTGC CGCTCAAGTC CTACAGCCAG CCACTGATCA TTATGTCAGT GATCCCCTTC GGGATTATCG GCGCCCTGTT TGGACATTTG ATCCAAGGGC TCGCCATGAG CGTGTTAAGC CTTTGCGGTA TCGTCGCGCT CGCCGGGGTG GTGGTAAACG ACTCCTTGAT CTTAGTGGAC TTTGTGAACC GAGCACGGGA GCAAGGACTA TCGATAAAAC AAGCGGCGGT GGACTCTGGA TGTTATCGTT TTAGGGCGAT TATCTTGACC TCATTGACAA CCTTCGTCGG TCTAGTGCCT ATTATTCTTG AGCGCAGCTT ACAGGCGCAG ATTGTGATCC CCATGGCGAC CTCCCTCGCC TTCGGTATCC TGTTCTCGAC TGTGGTGACC TTAATTCTGG TGCCTTTGTT GTACATCATA CTCGATGATG TGAAACGCAC CGCCAGCCGT TTTTACCACT GGTGGTGGCG CCCAAAGGCA TCTCAAGATA GGCATTTGCA TACCAATGAG AGCCACAGGG TATCCTTAGA TGCCTTAAAT GAACCGGACT ATAAACAGGA ATAG
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Protein sequence | MDTQKGILAW FARNSVAANL LMWALLIGGL FSTVLINKEV FPSFNLNLLS ITVAYPGAAP QEIEEGINIK IEEAIQDING IKKVTSVASE GVGSITVEVE DDYDVQTVLD EAKLRLDAIS TFPVNIEKPQ IYKIEPENNV IWVSVYGDMS LHDMKELAKS VRDDLTQLPA VTRAKVTGVR DYEIGIEVSE DKLREYGLTF SQVALAVQNS SIDLPGGSIR AEDGDILLRT KGQAYTGDDF ANIVVTTRAD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVTSVND QNALDIAQQV KDYVEKRRAT LPANAKLDTW GDLTHYLKGR LNMMMSNMFY GALLVFVILA LFLDLKLAFW VMMGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYSEVERHGH SIDNVIRGAQ KVAMPATFGV LTTIAAFIPM LMVSGPMGII WKSIGMVVIM CLAFSLVESK FILPAHLAHM KFRKPGEPTG FFGRFKDRFN NRVQHFIHHS YRNFLERCIQ HRYNVVAAFI GVLILSVALV VSGKVRWVFF PDIPSDFIQV QLEMDEGSSE QNTLKVVQDI EEALYKMNAK MEKDNGSEVV KHSFINMSSR TSAFIFAELT KGEDREVDGE TIAAAWREQL PELLSVKKLD FNASGNGGGG GDISFRLTSS DLEELSAAAR ELKQKLATYE GVYDIADNFS SGSHEIRLKI RPEAEALGLT LSDLARQVRY GFYGYEAQRI LRNKEEIKVM VRYPLEQRRT VGYLENMLIR TPQGKSVPFS TVAEVEKGES YASITRVDGK RAITIIANAN KHKVEPSKVV NEIQKDFLPQ LQAKYPKIQT TLDGGSLDEQ NAMVGLMQGF FFALFTIYAL MAVPLKSYSQ PLIIMSVIPF GIIGALFGHL IQGLAMSVLS LCGIVALAGV VVNDSLILVD FVNRAREQGL SIKQAAVDSG CYRFRAIILT SLTTFVGLVP IILERSLQAQ IVIPMATSLA FGILFSTVVT LILVPLLYII LDDVKRTASR FYHWWWRPKA SQDRHLHTNE SHRVSLDALN EPDYKQE
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