Gene Shewmr7_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3235 
Symbol 
ID4255736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3832908 
End bp3836111 
Gene Length3204 bp 
Protein Length1067 aa 
Translation table11 
GC content50% 
IMG OID638123918 
Productacriflavin resistance protein 
Protein accessionYP_739275 
Protein GI114048725 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.890283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTC AAAAAGGGAT CTTAGCCTGG TTTGCCCGCA ACAGCGTGGC AGCCAACCTG 
TTAATGTGGG CGCTACTGAT TGGCGGTCTA TTTAGCACAG TGTTGATTAA TAAAGAGGTT
TTCCCCTCTT TTAACCTTAA CTTATTGAGC ATTACCGTTG CTTATCCCGG CGCTGCGCCA
CAGGAAATCG AAGAAGGCAT CAACATCAAG ATTGAAGAAG CCATCCAAGA TATCAACGGC
ATTAAAAAAG TGACCTCGGT TGCCAGTGAA GGCGTTGGTT CAATCACGGT TGAAGTCGAA
GATGACTACG ACGTGCAAAC CGTACTCGAC GAAGCCAAGT TACGATTGGA TGCGATCTCC
ACCTTTCCGG TGAACATCGA AAAACCGCAA ATCTATAAAA TCGAACCCGA AAACAACGTG
ATTTGGGTGT CGGTTTACGG TGATATGTCG CTGCACGATA TGAAAGAACT GGCCAAATCG
GTGCGTGATG ATTTGACCCA ACTCCCCGCC GTGACCCGCG CGAAAGTCAC GGGGGTGCGC
GACTATGAAA TCGGTATCGA AGTCTCGGAA GATAAGCTAC GGGAATACGG CTTAACCTTC
TCGCAAGTCG CTTTGGCGGT GCAAAACTCT TCTATCGACT TACCGGGCGG TTCGATCCGT
GCCGAAGATG GCGACATTCT GCTGCGTACT AAAGGCCAAG CCTATACCGG CGATGATTTT
GCCAATATCG TCGTCACGAC CCGCGCCGAT GGTAGCCGAG TGATGTTGCC TCAAGTGGCA
ACCATTAAGG ACGATTTTGA AGAACGTTTA GAGTACACCC GCTTCAACGG CAAGCCTGCG
GCCATTATTG AAGTGACCAG CGTTAACGAT CAAAACGCCC TCGACATCGC TCAACAGGTC
AAAGACTACG TCGAGAAACG CCGTGCCACT CTACCAGCCA ACGCAAAATT AGACACTTGG
GGAGATTTAA CCCACTACCT CAAGGGCCGT TTGAACATGA TGATGTCGAA CATGTTTTAT
GGCGCCCTGT TAGTGTTTGT GATCTTAGCC CTGTTCCTCG ATCTCAAACT CGCCTTCTGG
GTGATGATGG GGTTACCCGT GTGTTTCCTC GGCACTATGC TGATCATGCC GCTGGAACCT
TTCTCCATGA CCATCAACAT GTTGACATTG TTCGCCTTTA TTCTCGTTTT GGGGATAGTG
GTCGACGATG CGATTGTGAT AGGCGAAAGC GCCTACAGCG AGGTCGAACG GCACGGACAC
TCGATTGACA ACGTGATCCG CGGTGCGCAA AAAGTGGCCA TGCCCGCCAC CTTCGGGGTG
TTAACCACTA TCGCCGCCTT TATTCCTATG TTGATGGTTT CTGGCCCCAT GGGGATTATT
TGGAAATCCA TCGGCATGGT GGTCATCATG TGTCTGGCGT TTTCACTGGT GGAATCTAAA
TTTATCCTGC CCGCGCACTT AGCCCACATG AAGTTTAGAA AACCAGGCGA ACCCACAGGA
TTCTTTGGTC GCTTTAAGGA TCGATTTAAC AATCGCGTTC AGCATTTTAT TCACCACAGT
TACCGTAACT TCCTCGAGCG CTGTATCCAA CATCGCTACA ACGTGGTCGC GGCCTTTATC
GGTGTGTTGA TTTTATCCGT CGCCTTAGTC GTCAGCGGTA AAGTGCGCTG GGTATTCTTC
CCCGATATTC CATCGGACTT TATCCAAGTG CAATTGGAGA TGGATGAGGG CAGCTCTGAA
CAGAACACCC TCAAGGTGGT GCAGGATATA GAAGAAGCCC TGTACAAGAT GAACGCCAAA
ATGGAGAAGG ACAACGGCAG CGAAGTGGTG AAGCACAGCT TTATCAACAT GAGCTCACGC
ACTTCCGCCT TTATCTTTGC CGAACTCACT AAGGGCGAAG ACCGGGAAGT AGATGGCGAA
ACCATTGCCG CCGCGTGGCG CGAGCAATTG CCCGAATTAC TGTCGGTGAA AAAACTCGAC
TTTAACGCCA GCGGGAACGG CGGTGGCGGT GGTGACATCT CCTTTAGACT GACCTCGAGC
GATCTCGAAG AATTATCCGC AGCCGCACGC GAGCTTAAGC AAAAGCTCGC CACCTACGAA
GGTGTGTATG ACATTGCCGA TAACTTCTCC TCGGGCAGCC ATGAGATCCG CTTAAAGATC
CGCCCAGAGG CCGAAGCGTT AGGCTTAACC TTGTCTGATT TAGCTCGCCA AGTCCGTTAT
GGCTTCTATG GTTATGAAGC ACAACGCATT TTGCGTAATA AAGAAGAAAT CAAAGTCATG
GTGCGCTACC CATTAGAACA GCGCCGAACC GTTGGCTACC TCGAGAATAT GCTGATCCGC
ACGCCGCAGG GTAAGTCGGT GCCTTTCTCC ACCGTAGCCG AAGTCGAAAA GGGTGAGTCC
TATGCCTCTA TCACCCGTGT CGATGGCAAA CGGGCGATTA CCATCATTGC CAATGCCAAC
AAACACAAGG TTGAACCTTC TAAGGTAGTA AATGAAATCC AGAAGGATTT CCTGCCGCAG
TTACAGGCCA AGTATCCGAA AATCCAAACC ACCCTCGATG GTGGCAGTTT GGATGAACAG
AATGCTATGG TCGGTCTCAT GCAAGGCTTC TTCTTTGCGC TGTTTACCAT TTATGCCTTG
ATGGCGGTGC CGCTCAAGTC CTACAGCCAG CCACTGATCA TTATGTCAGT GATCCCCTTC
GGGATTATCG GCGCCCTGTT TGGACATTTG ATCCAAGGGC TCGCCATGAG CGTGTTAAGC
CTTTGCGGTA TCGTCGCGCT CGCCGGGGTG GTGGTAAACG ACTCCTTGAT CTTAGTGGAC
TTTGTGAACC GAGCACGGGA GCAAGGACTA TCGATAAAAC AAGCGGCGGT GGACTCTGGA
TGTTATCGTT TTAGGGCGAT TATCTTGACC TCATTGACAA CCTTCGTCGG TCTAGTGCCT
ATTATTCTTG AGCGCAGCTT ACAGGCGCAG ATTGTGATCC CCATGGCGAC CTCCCTCGCC
TTCGGTATCC TGTTCTCGAC TGTGGTGACC TTAATTCTGG TGCCTTTGTT GTACATCATA
CTCGATGATG TGAAACGCAC CGCCAGCCGT TTTTACCACT GGTGGTGGCG CCCAAAGGCA
TCTCAAGATA GGCATTTGCA TACCAATGAG AGCCACAGGG TATCCTTAGA TGCCTTAAAT
GAACCGGACT ATAAACAGGA ATAG
 
Protein sequence
MDTQKGILAW FARNSVAANL LMWALLIGGL FSTVLINKEV FPSFNLNLLS ITVAYPGAAP 
QEIEEGINIK IEEAIQDING IKKVTSVASE GVGSITVEVE DDYDVQTVLD EAKLRLDAIS
TFPVNIEKPQ IYKIEPENNV IWVSVYGDMS LHDMKELAKS VRDDLTQLPA VTRAKVTGVR
DYEIGIEVSE DKLREYGLTF SQVALAVQNS SIDLPGGSIR AEDGDILLRT KGQAYTGDDF
ANIVVTTRAD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVTSVND QNALDIAQQV
KDYVEKRRAT LPANAKLDTW GDLTHYLKGR LNMMMSNMFY GALLVFVILA LFLDLKLAFW
VMMGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYSEVERHGH
SIDNVIRGAQ KVAMPATFGV LTTIAAFIPM LMVSGPMGII WKSIGMVVIM CLAFSLVESK
FILPAHLAHM KFRKPGEPTG FFGRFKDRFN NRVQHFIHHS YRNFLERCIQ HRYNVVAAFI
GVLILSVALV VSGKVRWVFF PDIPSDFIQV QLEMDEGSSE QNTLKVVQDI EEALYKMNAK
MEKDNGSEVV KHSFINMSSR TSAFIFAELT KGEDREVDGE TIAAAWREQL PELLSVKKLD
FNASGNGGGG GDISFRLTSS DLEELSAAAR ELKQKLATYE GVYDIADNFS SGSHEIRLKI
RPEAEALGLT LSDLARQVRY GFYGYEAQRI LRNKEEIKVM VRYPLEQRRT VGYLENMLIR
TPQGKSVPFS TVAEVEKGES YASITRVDGK RAITIIANAN KHKVEPSKVV NEIQKDFLPQ
LQAKYPKIQT TLDGGSLDEQ NAMVGLMQGF FFALFTIYAL MAVPLKSYSQ PLIIMSVIPF
GIIGALFGHL IQGLAMSVLS LCGIVALAGV VVNDSLILVD FVNRAREQGL SIKQAAVDSG
CYRFRAIILT SLTTFVGLVP IILERSLQAQ IVIPMATSLA FGILFSTVVT LILVPLLYII
LDDVKRTASR FYHWWWRPKA SQDRHLHTNE SHRVSLDALN EPDYKQE