| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3226 |
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| Symbol | |
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| ID | 4255727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3819013 |
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| End bp | 3820737 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123909 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_739266 |
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| Protein GI | 114048716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCATA AGATAGTCCG TCGTCCAACC GTTGATGATA GCCATTTACC CGCTCACCTT
CCGCCGTTAT TAAGACAGCT TTACGCCCGC CGTGGTGTTA TGCCCAACGA ATGCGAATTG
GTGCTCAAAG GCCTGTTAAG ACCCGATACA ATGAAGGGCT TGGAGCCGGC CGCTAAGTTG
ATTGCCGATG CGATGCAGCA GGATAAGTCG ATACTGATCG TCGGCGATTT TGATGCCGAC
GGCGCTACCT CGACCAGTGT GTGTTTGCTA GCGCTGCGGA TGATGGGCGC GAGCAAGGTC
GATTATCTGA TCCCCAATCG TTTCGATTAC GGTTATGGCC TAAGCCCTGA GATTGTCGCC
GTGGCGGCAT CCAAACAGGC AGAATTACTT ATCACTGTTG ATAACGGCAT TTCCTCGATT
GAGGGTGTAG CCGCCGCCAA AGCCTTTGGC ATGCAGGTGG TGATCACCGA CCATCACTTA
CCCGGCCATG AGTTACCGGC GGCCGATGCC ATAGTGAATC CCAACCAACC CGGTTGTCAG
TTTGCCAGTA AATCCATTGC TGGCGTCGGG GTTGCCTTTT ATCTGATGAC GGCGCTTAGG
GCTGAGCTGC GCGCTCGTCA TTGGTATCAA GCCCGCGGCA TTGCCGAGCC AAACCTTGGC
ACTCTGCTGG ATATTGTTGC CCTTGGCACT GTGGCCGACG TGGTGTCGCT CGATGCCAAC
AATCGTATTC TGGTCGAGGC GGGATTGCAG CGGGTACGCA GTGGTCGATG CCGTGTGGGC
ATTACCGCTT TACTCGAAGT GGCAAAACGT AATCCAGCTC GTATTGTCGC CTCGGACTTT
GGCTTTGCCG TAGGGCCTAG GCTTAATGCC GCCGGCAGGC TGGATGAAAT GGCGCTTGGT
GTTGAAACCC TGCTGTGCGA AGACATCATG TATGCAAGGC GGATGGCGGC AGAACTCGAT
AGTCTCAACC AAGAGCGACG TGAGCTTGAG GTCGGGATGC AGCAAGAGGC GCTGAAAAGT
CTTGAATATC TAAAGCTTAA TGAAGAGCAA CTTCCGTGGG GTATTGCCCT CTTTCAAGAG
GATTGGCACC AAGGGGTTAT CGGTATTCTT GCTTCGCGGA TTAAAGATAA ATACCACAGA
CCCGTTATCG CCTTTGCCGA CGCGGGTAAT GGTGAAATTA AAGGCTCGGC GCGCTCCATA
AAAGGTTTGC ATATGCGCGA TTTGCTGGAG CTGGTTAACT CGCGCCATCC TGGGCTTATC
AGCAAATTTG GCGGCCACGC AATGGCGGCG GGCTTAACTT TAAAGTCCGG TGGCTTCGCA
ACCTTTGCTA AAGCCTATGA TGATGCGGTG CGTGAACTGT TAAAGCCTGA GCAGCTCACG
GGTGAGCTTT GGTCCGATGG TGAATTAACG CCGGCCGAAC TTACCCTCGA AATCGCCCAG
TTACTCCGTA ATGCCGGACC TTGGGGTCAG TCCTTCGAGG AGCCATTATT CGATGGTTAT
TTTAAGATTA TCCAGCAGCG GATTGTGGGG GAGCGTCACC TTAAATTAGT GCTTGAAACT
CCATGCAGTA CCGTGATGTT AGACGCGATT GCCTTTAATG TGGATTTACA CACTTGGCCC
GATGCGACGA TTCAACATGC GCGCATCGTT TATAAGCTGG ATGTAAACGA ATATCGCGGT
AATTTCACCC TGCAGTTGAT GGTCGAGCAA ATCGAGCCAA TGTAG
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| Protein sequence | MIHKIVRRPT VDDSHLPAHL PPLLRQLYAR RGVMPNECEL VLKGLLRPDT MKGLEPAAKL
IADAMQQDKS ILIVGDFDAD GATSTSVCLL ALRMMGASKV DYLIPNRFDY GYGLSPEIVA
VAASKQAELL ITVDNGISSI EGVAAAKAFG MQVVITDHHL PGHELPAADA IVNPNQPGCQ
FASKSIAGVG VAFYLMTALR AELRARHWYQ ARGIAEPNLG TLLDIVALGT VADVVSLDAN
NRILVEAGLQ RVRSGRCRVG ITALLEVAKR NPARIVASDF GFAVGPRLNA AGRLDEMALG
VETLLCEDIM YARRMAAELD SLNQERRELE VGMQQEALKS LEYLKLNEEQ LPWGIALFQE
DWHQGVIGIL ASRIKDKYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE LVNSRHPGLI
SKFGGHAMAA GLTLKSGGFA TFAKAYDDAV RELLKPEQLT GELWSDGELT PAELTLEIAQ
LLRNAGPWGQ SFEEPLFDGY FKIIQQRIVG ERHLKLVLET PCSTVMLDAI AFNVDLHTWP
DATIQHARIV YKLDVNEYRG NFTLQLMVEQ IEPM
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