Gene Shewmr7_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3217 
Symbol 
ID4254974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3810756 
End bp3811493 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID638123901 
Productdienelactone hydrolase 
Protein accessionYP_739258 
Protein GI114048708 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.445635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTGA CTCAGCAAAC TCAGGATATC AACACGCCCA CAGGGCCGAT GCGAACTTAT 
GTCTATCGCC CAGATGCCCC AGGGCAATTC CCCTGTATCC TCTTCTATTC TGAGATTTTT
CAGCAAACCG CGCCCATCGC CCGCACCGCG ACTATCCTCG CTGGCCATGG TTTTGTGGTG
TTAGTGCCAG AAGTCTTCCA TGAGCTTAAT CCGATAGGCA CAGTACTAGC CTACGATGAT
GTGGGTAAAG ATAAAGGCAA TGCCGATAAA TTTGCCAAGC CCTTAGAGCA GCACGACGGC
GACACCCAAG CCCTTATCGA TTTTGCCCGC CAGCAGAGTT ATTGCACGGG TAAGGTCGGC
AGTATGGGTG TGTGTATTGG CGGCCACTTA GCCTACCGCG CCGCACTTAA TCCCGAGATT
TTAGGGGCGT TTTGCCTCTA TCCGACCGAC ATTCACTCCA ATACCCTGCC CTGCGCCTAC
GGCAATGATT CACTGAGTCG CAGCGGCGAT ATTCAAGGGG AATTAGTGTT AGTGTTTGGC
AAACAAGATC CCCATATATC ACCCGAAGGT CGGGTATTAA TCCACCAACA ATTGATGGCT
AAAAACCGTA ATTTCAGTTG GTTAGAGGTT AATGCTCAGC ATGCCTTTAT GCGTGATGAG
GGTGAGCGCT ACGATCCCGC GCTGGCGCTG CAAATGTATC AACAATCCGT GGCGTTTTTT
CACCGAGTGT TGAGATGA
 
Protein sequence
MLVTQQTQDI NTPTGPMRTY VYRPDAPGQF PCILFYSEIF QQTAPIARTA TILAGHGFVV 
LVPEVFHELN PIGTVLAYDD VGKDKGNADK FAKPLEQHDG DTQALIDFAR QQSYCTGKVG
SMGVCIGGHL AYRAALNPEI LGAFCLYPTD IHSNTLPCAY GNDSLSRSGD IQGELVLVFG
KQDPHISPEG RVLIHQQLMA KNRNFSWLEV NAQHAFMRDE GERYDPALAL QMYQQSVAFF
HRVLR