Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3202 |
Symbol | |
ID | 4256231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3796963 |
End bp | 3797805 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638123886 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_739243 |
Protein GI | 114048693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.118328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.301135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGTTA ACGCTAGCAA ACGATTCTTA CTGCTCGCAC TATTACTAAG TAATTGTGCC ATGCTGCAAG CTAAAGAAAT TGAAACAGTT TCCGCTGGAG ATTGGCAGAT TTCCCTTGCC GCGGGTTATG GCGCACTCGA AAACCCAAGG GCTAAGGTGG AGAACATCAA CACTTGGGTG CTACCCACTT GGTATTATTA CGGTGAGAAC TTTTATGTCG AAAACTTCAC CTTAGGTTAT AGCCTGTACG AATCGGAAAG TTTTATTGTC GACGTACAGA CTCGCTTTAA TGAGGACGGT TTTTTCTACG AATTCGATGG ACTGAATAAA CTATTACTGA GTGATATTTT AGGTTATACC CCAGTGAAAC AGCCCATTAA TCCAAAAGCC GTCAAATTTG AGGAAATTGA GCGTAATCTT TCCTACTTAG GTGGACTAAA CGCCACTTGG GTGACCCCCT ATCTCGATGT GACTTTAGGT TACTTCCACG ATATTACTGG GGTACACCAA GGCAATGAAA TTCAGCTCAG GCTAAAACAC AGTCAGGCGT TTTCTTGGGG CGCGCTCGGC TTTGAAGTCG GGGCGATTCG AAAAAGTGAA AACCTCGTCA GTTACTACTA CAAACTCACC AAGGAGGAAG AAGGACCACT GCATCCTAAA TATAATCCCT CGGCCGCAAT CAATTATCAT GCCCGTACAG TCGTCAACGT CCCCATTTTC GACAACGTCA ACTTTGTCGG GATCCTCGAG TATACTTGGT TAGGACAAGA GATCACTGAC AGCGTACTGA TAGATAAAGA TGGCTATGTG TCTGGATTTG TAGGGATCAG TTATGACTTC TAA
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Protein sequence | MTVNASKRFL LLALLLSNCA MLQAKEIETV SAGDWQISLA AGYGALENPR AKVENINTWV LPTWYYYGEN FYVENFTLGY SLYESESFIV DVQTRFNEDG FFYEFDGLNK LLLSDILGYT PVKQPINPKA VKFEEIERNL SYLGGLNATW VTPYLDVTLG YFHDITGVHQ GNEIQLRLKH SQAFSWGALG FEVGAIRKSE NLVSYYYKLT KEEEGPLHPK YNPSAAINYH ARTVVNVPIF DNVNFVGILE YTWLGQEITD SVLIDKDGYV SGFVGISYDF
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