Gene Shewmr7_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3193 
Symbol 
ID4256222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3775392 
End bp3777701 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content49% 
IMG OID638123877 
Producthypothetical protein 
Protein accessionYP_739234 
Protein GI114048684 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACT CGCCATTTCG CTTTATTAGC CTCGCCATTG CCGGGAGCAG CCTAGTCGGC 
GTCCATGCTC AGGCGGCGCA AAACCTCTCC TCCATGATGG TCGAAATTCG CCAGCAGGAC
GGTATTCCCA GCTATTACAA TCTCGCCACG GGCATGCCCT TAAATGGTGA TATCGCCATC
GTTCGCGATA ACCAAGGTTA TACTTTAGGG CAATTTTCGC AGGGGATACC GAATGGAAAA
TGGCAGGTTT TTCATAGTAA TAACAGCAGA ATTGTCGAAG GTAACTATCA ACTCGGTTAC
CAAGATGGCA CCTGGCGACT GTTCGACTTA GATGGCGCCA TGACCGAGGA GCAGCAATTT
GCCAAGGGAG TCCCCGTTGG CGAATGGAAG GAATTTAACG CCACGGGCAA TGTTACCCAA
AGCACCCTCT ATAAAAATGG CCAAAAGTCC CAAGTAAAAC GATTCTTCCC GAGTGGCAAA
TTACAGGCGC AAGAAAGCTA CCTCGATAAC CTTCGCCACG GTAAATGGGA AAGCTTTTAT
GAGAATGGCA CCCTCTCCCA AAGCCAAACC TACGCCAATA ACCAACTCTC TGGCCCCTAT
CTCGAGCAAA ATGCCGAGGG CCAAGTCGTT GTGAGTGGCC GCTTCGATGC CGATGGCCGC
CGCCAAGGTT TATGGGAAAC CTTTTTCGAC GATGGCACTA AGGCCAGTGC CAGCCAATTT
AATCTCGATA AACTCGAGGG TGAAGAACGC ACCTTTTATC CCAGTGGCGA ACTGGCAAGC
TTGTGCCACT ATCAAGCGGG GCTTCGCCAC GGTAAATGTC AACAATTCAA TGAACTGGGT
AAACTCCAAG TGGAGGAGCA ATACCTCAAC GATGTGCTAG AGGGGCGCCA GCAATACTTT
AACCTTGAGG GTGTACTGAC CAGCGATTTG AACTACAAGC AGGATATGCT CGCTGGCACG
CAAAAGTATT TCCACGCCAA CGGCCAACTG AAAGAGCTGC GAACCTATCA GGACTCGCAA
CTGGCCGATA ATGGTCAATA CCCCTTGCAT GGCCCATCTG AGCGTTATGA TGCGGACGGT
AATCTTATCG AAAAAAGCAG CTACAACATG GGCTTGAAAG ATGGGTTATT TGAACGCTAT
AACGGCGGTA AACTGCAAAC CGCAGAGGTA TGGAAGCTAG GTCAAAGAGA CGGAGAATTC
CGTCGTTACC ACACTAATGG CCAACTACGC AGCTTAGATG TGTACGTCGA TGGCAAACTC
ACTGGCCGCT CCGAATCCTA CTATGAGGAT GGCTCGGTGA ATGAACGCGG TGAGCGCATC
GAAGGCGCGT GGGTCGGTAA ATACGAATCC TTTTACGACA ATGGCAAGCC AAGAGAACTC
GCCCACTACG CCCGCACGAA AGCGGATAAC AGCAATAGCT ATCCCCTCGA TGGCCACTTT
AGTCGTTGGT ACTACAATGG CGATCTCAAT GAGGAAGGAG ATTATCAAAG CGGCGTAAAA
GAAGGACTGT GGATCCAATA TCAACAGGGG CAAAAACAAA AAGAACAGAC CTTTGTTAAC
GGCAAACTCA ATGGCAATTA TGCCGAGTAT TACCAAGGTC GCCGCCGCGT CACTGGCCAA
TATGAGGATA ATCAAAAAAC TGGTCTCTGG ATTGATTACC GCTATGAAGC CAAAGACCCA
ACCTATGGCG CGATCCCCGA GGGCAATATC AGTCAGAAAA CCCATTGGAA GGATAATAAA
CGTAACGGCA CAAGCGAGTA CTACAGCTTT AAGCAAGTGG TTTATCGTTT AGAAACCTAT
GATAACAATG ATAAAACGGG CACCTATGCC GAATATTATC CTAACAATGG CCAGCTCAAA
CTGAGCGGCA CTATGGATAA AGGTCAGCAA ACAGGACTGT GGGAAAGCTG GTATGAGGAT
GGCATTTTAG CCGCCAGCAG CGAATTTTTA GATAACCAAC AGCATGGCAG CAGCAAAGAG
TATTACAGCA ATGGCCAGCT CAAACTCGAA GCCCAATACA CTAAAGGCGA ACTCGACGGC
GAGCGCAGGG AATACCACCA AAATGGTAAA CCTAAACTAA TTGAAACTTG GTTAAAGGGT
CAGAAGGAAG GCGATGCCAG CTATTACCAC ACCAATGGCA AACTCGCCGA ACAAGGCACT
TATCTTAAGG ATCGCAGGGA AGGCTTATGG CAGCAATTTT GGCCCAGTGG CGAAAAACGC
AGTGAAGGCA GCTATATCGC CGACCGACAA GCGGGGGATT GGAGCCACTA CGATCAGCTC
GGTAAGTTGA TTAATACCGA GCATTTCTAA
 
Protein sequence
MYNSPFRFIS LAIAGSSLVG VHAQAAQNLS SMMVEIRQQD GIPSYYNLAT GMPLNGDIAI 
VRDNQGYTLG QFSQGIPNGK WQVFHSNNSR IVEGNYQLGY QDGTWRLFDL DGAMTEEQQF
AKGVPVGEWK EFNATGNVTQ STLYKNGQKS QVKRFFPSGK LQAQESYLDN LRHGKWESFY
ENGTLSQSQT YANNQLSGPY LEQNAEGQVV VSGRFDADGR RQGLWETFFD DGTKASASQF
NLDKLEGEER TFYPSGELAS LCHYQAGLRH GKCQQFNELG KLQVEEQYLN DVLEGRQQYF
NLEGVLTSDL NYKQDMLAGT QKYFHANGQL KELRTYQDSQ LADNGQYPLH GPSERYDADG
NLIEKSSYNM GLKDGLFERY NGGKLQTAEV WKLGQRDGEF RRYHTNGQLR SLDVYVDGKL
TGRSESYYED GSVNERGERI EGAWVGKYES FYDNGKPREL AHYARTKADN SNSYPLDGHF
SRWYYNGDLN EEGDYQSGVK EGLWIQYQQG QKQKEQTFVN GKLNGNYAEY YQGRRRVTGQ
YEDNQKTGLW IDYRYEAKDP TYGAIPEGNI SQKTHWKDNK RNGTSEYYSF KQVVYRLETY
DNNDKTGTYA EYYPNNGQLK LSGTMDKGQQ TGLWESWYED GILAASSEFL DNQQHGSSKE
YYSNGQLKLE AQYTKGELDG ERREYHQNGK PKLIETWLKG QKEGDASYYH TNGKLAEQGT
YLKDRREGLW QQFWPSGEKR SEGSYIADRQ AGDWSHYDQL GKLINTEHF