Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3181 |
Symbol | |
ID | 4256979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3755953 |
End bp | 3757101 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638123865 |
Product | transport system permease protein |
Protein accession | YP_739222 |
Protein GI | 114048672 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGACA CACTCAAATT GGTGACCATG AATTTTTTTA GCCACATTTT TACGCCGCTC ACCCGCCAGC AATGGCTGAT TTTAGGCTTG GCGGGCTTTG CCCTGCTCAC CCCCATCGCT GCCGCGAGTT TTGGCGCGGC AAACATTAGC TTTTTAGATG TGCTGCATGT GTTTATCAAT AAATTCAATC ACCTTTTTGC CAGTGATGTC GAAGTCAGCA CGGCCAGCAT GACCGAACGG ATTGTGATGG AATTAAGATT GCCACGGATT TTACTCGCCT TTGTGGCGGG GGCAGGGTTG TCCTTGGCGG GGAGCGTGCT GCAAACCGTG ACCCGTAACC CCCTTGCCGA TCCTTATCTG TTTGGCATTA GCTCCGGCGC CTCCTTTGGT GCCGTGGTCA TGCTGACGCT GTTTACCGGT TCTGGCCTGT TTGGTAATGG GGGCGCCATT GCCAACTCAG GGATTTTTAG CGGTTCGGGC AGCTTTGCGG GGCTGCTCTG GTTGAGCTTA CCCTTCGGCG CCTTTATCGG CGCGAGTCTG TCGGTGCTGA TAGTGCTGGC CTTGGCGGGC TTAGGCCTTA AGAGCCAAGT GGAGCGGATG TTGCTCTCAG GCGTGGCGAC CTCCTTTATG TTTAGCGCGC TAACCAGCTT ATTGCTGTAC TTTGCCAGCC CGCAGGCTAC CGCATCGGTA TTGTTTTGGA GTCTTGGCAG TTTTGCTAAG GCCAGTTGGT CGTTGTTGGT GCTGCCGTCC TTAGTGGTGC TGGTGAGCTT TTTGATTATT CTCGGTTGGA AGCGCCAAAT CATGGCGTTG CAAGCGGGGG ATGAAACGGC CCATACCTTA GGGGTGAATG TGCCTAAGCT GCGCCTCAAT ATGCTGCTGC TCTGCTCGCT TATCACCGCC ATTTTAGTAG CGACCTGTGG CGGCATTGGC TTTGTCGGCT TGATGATCCC GCACACAGTA CGTTTGTTAT TCCCCGGTCG TCAGCCCATC TTATTGACGG GGCTGGTGGG CGGCCTGTTT ATGGTGTGGA TTGATGTGCT CGCCCGATGT TTGCTTGGCA ATCAGGAATT ACCCGTAGGG ATTATCACCG CCGCGATTGG TAGCTTCTTC TTTTTGTTGA TTTTGCGTCG ACGAAAGTTG TCGAACTAG
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Protein sequence | MIDTLKLVTM NFFSHIFTPL TRQQWLILGL AGFALLTPIA AASFGAANIS FLDVLHVFIN KFNHLFASDV EVSTASMTER IVMELRLPRI LLAFVAGAGL SLAGSVLQTV TRNPLADPYL FGISSGASFG AVVMLTLFTG SGLFGNGGAI ANSGIFSGSG SFAGLLWLSL PFGAFIGASL SVLIVLALAG LGLKSQVERM LLSGVATSFM FSALTSLLLY FASPQATASV LFWSLGSFAK ASWSLLVLPS LVVLVSFLII LGWKRQIMAL QAGDETAHTL GVNVPKLRLN MLLLCSLITA ILVATCGGIG FVGLMIPHTV RLLFPGRQPI LLTGLVGGLF MVWIDVLARC LLGNQELPVG IITAAIGSFF FLLILRRRKL SN
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