Gene Shewmr7_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3181 
Symbol 
ID4256979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3755953 
End bp3757101 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content53% 
IMG OID638123865 
Producttransport system permease protein 
Protein accessionYP_739222 
Protein GI114048672 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACA CACTCAAATT GGTGACCATG AATTTTTTTA GCCACATTTT TACGCCGCTC 
ACCCGCCAGC AATGGCTGAT TTTAGGCTTG GCGGGCTTTG CCCTGCTCAC CCCCATCGCT
GCCGCGAGTT TTGGCGCGGC AAACATTAGC TTTTTAGATG TGCTGCATGT GTTTATCAAT
AAATTCAATC ACCTTTTTGC CAGTGATGTC GAAGTCAGCA CGGCCAGCAT GACCGAACGG
ATTGTGATGG AATTAAGATT GCCACGGATT TTACTCGCCT TTGTGGCGGG GGCAGGGTTG
TCCTTGGCGG GGAGCGTGCT GCAAACCGTG ACCCGTAACC CCCTTGCCGA TCCTTATCTG
TTTGGCATTA GCTCCGGCGC CTCCTTTGGT GCCGTGGTCA TGCTGACGCT GTTTACCGGT
TCTGGCCTGT TTGGTAATGG GGGCGCCATT GCCAACTCAG GGATTTTTAG CGGTTCGGGC
AGCTTTGCGG GGCTGCTCTG GTTGAGCTTA CCCTTCGGCG CCTTTATCGG CGCGAGTCTG
TCGGTGCTGA TAGTGCTGGC CTTGGCGGGC TTAGGCCTTA AGAGCCAAGT GGAGCGGATG
TTGCTCTCAG GCGTGGCGAC CTCCTTTATG TTTAGCGCGC TAACCAGCTT ATTGCTGTAC
TTTGCCAGCC CGCAGGCTAC CGCATCGGTA TTGTTTTGGA GTCTTGGCAG TTTTGCTAAG
GCCAGTTGGT CGTTGTTGGT GCTGCCGTCC TTAGTGGTGC TGGTGAGCTT TTTGATTATT
CTCGGTTGGA AGCGCCAAAT CATGGCGTTG CAAGCGGGGG ATGAAACGGC CCATACCTTA
GGGGTGAATG TGCCTAAGCT GCGCCTCAAT ATGCTGCTGC TCTGCTCGCT TATCACCGCC
ATTTTAGTAG CGACCTGTGG CGGCATTGGC TTTGTCGGCT TGATGATCCC GCACACAGTA
CGTTTGTTAT TCCCCGGTCG TCAGCCCATC TTATTGACGG GGCTGGTGGG CGGCCTGTTT
ATGGTGTGGA TTGATGTGCT CGCCCGATGT TTGCTTGGCA ATCAGGAATT ACCCGTAGGG
ATTATCACCG CCGCGATTGG TAGCTTCTTC TTTTTGTTGA TTTTGCGTCG ACGAAAGTTG
TCGAACTAG
 
Protein sequence
MIDTLKLVTM NFFSHIFTPL TRQQWLILGL AGFALLTPIA AASFGAANIS FLDVLHVFIN 
KFNHLFASDV EVSTASMTER IVMELRLPRI LLAFVAGAGL SLAGSVLQTV TRNPLADPYL
FGISSGASFG AVVMLTLFTG SGLFGNGGAI ANSGIFSGSG SFAGLLWLSL PFGAFIGASL
SVLIVLALAG LGLKSQVERM LLSGVATSFM FSALTSLLLY FASPQATASV LFWSLGSFAK
ASWSLLVLPS LVVLVSFLII LGWKRQIMAL QAGDETAHTL GVNVPKLRLN MLLLCSLITA
ILVATCGGIG FVGLMIPHTV RLLFPGRQPI LLTGLVGGLF MVWIDVLARC LLGNQELPVG
IITAAIGSFF FLLILRRRKL SN