| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3180 |
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| Symbol | cobT |
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| ID | 4256978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3754751 |
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| End bp | 3755803 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123864 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_739221 |
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| Protein GI | 114048671 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAT CTGTCCCGTC ATTTCAAATC GAGCCTGTGA GTAAAGCGCA GGATCAATTC
ATCCAGCAAA AGATCGATCT TAAGACAAAG CCGCCAGGCG CTCTGGGGTT GTTAGAACCC
TTGGCGCTGC AAATTGCCCG CATTCAAGGG CCTCAGCAAT TACAGATAGT GAACCCAACC
ATGTTGGTGT TTGCTGGGGA TCATGGGATT GCCGCCGAAG GCGTGTCGAT TGCCCCGAGT
GAAGTCACGC GGCAAATGGT GCAAAATTTT GCCCATGGCG GCGCGGCTAT CAATGTGTTT
TGTCGCCAAT TAGGCTTCAA TCTCGAAGTG ATTGATTGCG GTATTTTAAC CCCGGTTGAG
GGTGTCGAAG GCATTATCGA CCAACGCCTT GGCGCGGGCA CTGGCGCAAT TCACTTAGAG
CCAGCGATGA GTTTAGCTTG TGTGGACAAG GGCTTTGCCA TGGCGCAAGC GTTAATCGAG
CGCCACCATC AAGCGGGTTG TAACTTGGTC GCCTTTGGTG AGATGGGCAT AGGCAACACC
TCTTCCGCTG CGGCGATTAT GGCGGCCATT ATGCAACTCG ATGTGGCCGA CTGTGTTGGC
CGTGGCACGG GGATCAGTAG CGAAACCCTA GAGCGTAAAC AGATGCTTAT CGAACTCGCA
CTGCTGTTAC ATCAGAGTGC GATGACAGGG CCAAAGCAAG TGCTGGCCTG TTTGGGCGGC
TTTGAAATTG TGCAAATGAC GGGGGCCATG CTCGCCGCCG CCGAGCGCAA GATGCTGGTC
GTGGTGGATG GTTTTATTGC AACCGCGGCG GCTTTGGTTG CCGTGACTAT CAATGCCCAT
GTGCGGGATT ATTTGATTTT TGCCCACCGC TCCGAGGAGC AAGGTCATCA GCGGATGTTG
GAACATTTAA AGGCTAAACC TTTGTTATCT TTAGGGCTGA GATTAGGCGA AGGCACGGGC
GCTGCCTTGG CATTGCCGTT AATTCAAGCC GCAGTAAATT TTTACAATCA AATGGCGAGT
TTTAGTGATG CCGGGATTGA GGCTGTTGTA TGA
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| Protein sequence | MSQSVPSFQI EPVSKAQDQF IQQKIDLKTK PPGALGLLEP LALQIARIQG PQQLQIVNPT
MLVFAGDHGI AAEGVSIAPS EVTRQMVQNF AHGGAAINVF CRQLGFNLEV IDCGILTPVE
GVEGIIDQRL GAGTGAIHLE PAMSLACVDK GFAMAQALIE RHHQAGCNLV AFGEMGIGNT
SSAAAIMAAI MQLDVADCVG RGTGISSETL ERKQMLIELA LLLHQSAMTG PKQVLACLGG
FEIVQMTGAM LAAAERKMLV VVDGFIATAA ALVAVTINAH VRDYLIFAHR SEEQGHQRML
EHLKAKPLLS LGLRLGEGTG AALALPLIQA AVNFYNQMAS FSDAGIEAVV
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