Gene Shewmr7_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3178 
Symbol 
ID4256976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3753267 
End bp3753869 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content54% 
IMG OID638123862 
Productadenosylcobinamide kinase 
Protein accessionYP_739219 
Protein GI114048669 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCATT TAGTGCTAGG TGGCGCGCGT AGCGGTAAGA GCCGCTACGG CGAAGCCTTA 
GTGCGCCAGT ATACCGCCCT CGGATTCGAT GCCTGCTATC TGGCGACTGC ACAGGCGCTC
GATGCCGAAA TGAGCAGTCG CATTCGTTTA CATCAGGATG GACGTGCCAA GGATGATATC
GACTGGCAAC TCGTCGAAGA ACCCTTGGCA TTAACCGCCA AGCTCAAACA CTTAGCCAAA
CCCGGCCGAG TGATTCTGGT GGATTGTTTA ACGCTTTGGC TCACCAATCA ATTACTTGCA
CAGAGCCCCG AGGCCGAGCC CGCTTCAACG GAATCGGACT TTGCCTTGGA TTTTGCCAGC
TCTCGCCATG AGCCTTTAGA GCACTGGCGG CAGCAACGCG CCGATTTTAT CCAGACCTTA
AGCACCCTTG AGGGCGTAGT GATTTTAATC AGCAATGAGG TCGGCTCTGG CATTGTGCCC
TTGGGCGAAT TGAGTCGTCA GTTTGTCGAT GAAGCGGGTT GGTTAAATCA GGCCGTTGCC
GAGGTGGCGG ATAATGTGAC CTTAGTGGTG GCGGGTCTGC CACTGGTGCT TAAATCCAGC
TAA
 
Protein sequence
MIHLVLGGAR SGKSRYGEAL VRQYTALGFD ACYLATAQAL DAEMSSRIRL HQDGRAKDDI 
DWQLVEEPLA LTAKLKHLAK PGRVILVDCL TLWLTNQLLA QSPEAEPAST ESDFALDFAS
SRHEPLEHWR QQRADFIQTL STLEGVVILI SNEVGSGIVP LGELSRQFVD EAGWLNQAVA
EVADNVTLVV AGLPLVLKSS