| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3168 |
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| Symbol | |
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| ID | 4254837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3745252 |
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| End bp | 3745668 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123852 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_739209 |
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| Protein GI | 114048659 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGC GCAAGCAAAA AGGATTTTCT CTGATAGAGA TCATGGTGAC TTCTTTTATT
GTGGCCTTTG GAATACTGGG CATGGCGGCT TTGCAGCTCA AGTCGCTACA GGCCGCGCAT
TCGGCATATC AAAGAACGAT TGCCAGTGTG ATTGCTATGG ATGTGGTTGA ACGCCTTTGG
GCCAATATGG CCATGGATAC TCCGCTCACC GAAACTCAGT TACAGGAACA GTCACTCGCT
CACTGGCAGC AAACGGCCAA TAGTCGTCAG TCTTTGCCAG GTTTGGGGCT AACGCTCACC
AATGCCACTG GCACTAACAC CTATGTTATT ACTGTGGACT GGGGAGAGTC ACGCTTTGGG
GAAAACGATG TCCCGTCTCA GTTTATTTAC TCCGTCGATC TCTATCCCGG CAGTTGA
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| Protein sequence | MNKRKQKGFS LIEIMVTSFI VAFGILGMAA LQLKSLQAAH SAYQRTIASV IAMDVVERLW
ANMAMDTPLT ETQLQEQSLA HWQQTANSRQ SLPGLGLTLT NATGTNTYVI TVDWGESRFG
ENDVPSQFIY SVDLYPGS
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