| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3155 |
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| Symbol | |
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| ID | 4254824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3731487 |
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| End bp | 3733154 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123839 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_739196 |
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| Protein GI | 114048646 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTACTGC GAACAAAATT AATCATTTAT TCAACAGTTT GTTGTGCTTT GGGTGTGTTA
CTCACCCTAG GCGCCATGAG TTATCGCTCG TCAGTTTCCT CTCTCGTGGA GGATGCTCCC
CATACGTTGC CCGATATTAC CGTGCCCGAG CTGGATTTGG CGCAGCTCGA AGATGCGGTG
GCCGCAATCG AATCGACGAT TAAGGATACT GAGCAATTTC AAAAGGCACT CTCATTGCAG
GAGCGCTTGA AGACAGAGCA AATCAAACAC GAGCTGCAAA AGTTAGAGCA ACTAAAACAA
GAGCAAGTGC AGATTAAGCT CTATAAGCTC GATCGTTTGA AGGACGGGCT TTTTAGTCCC
GCCCCCCATC CTATTGAGGC GCCACCAATG GTTGCGCCTG TTGAACCTGT TATCCCCGCC
GAATTTAGCC TGTCGGAACA GACTCAGTCG ATGCCAGCAG TATTTGATAT GCTGCTGATA
TTGCTGCTGG CCTGTGGTAG CTGCGCGCTT GGGGTTGCTT GGTTTACCCG CCATTTAGCT
CGCAGTCTCA ATGCCTTAGA GGTTGGTTTA CTCAACTTTA ATGACAATGA CTTTAGCGTG
AGCATTCCGG CCAATGGTGA GGGGCAGTTG AAAGCATTGG CTGAGTTATT CAATGATTCG
GCGGCTAAGC TGCGCCAAGA GCGGCAATAC ATTTACCAGC GCGAATTGCT ATTGGATAAG
GTGATTCAAA GCTCTCCGAA TGTGATGCTG CTGTTTAATG ACCATCAAAA ACTCATGTAT
GCCAACGATG CGGCGCGGCA TCTTTTTCAT ATCAAAGGCA AGATGGAAGG ATTGAGCCTC
GACGAGTTGC TGCAAGACTT ACCCGAAGCG CTTGCCTTGG CCCTTAAGCA AGAAAAGAGC
GGACTGTTTA CCATGGGTGA GGATGATACT GAGACTTGGT ATCTGAGTCG TGGCCAGTTT
TTACTGAATA ACCAGCAGCA TAACTTAATT TTGCTCAAGC AGATGACCCG AGAGCTCAAT
CGTCAGGAAG TGGCGGTATG GAAGAAGGTG ATCCGCATTA TCAGCCATGA GCTAAATAAT
TCCGTTGCGC CAATCGCCTC CATGGTGAAC TCGGGGCGTT TACTGACGAA AGATCTCGAT
AATCCTAAGC TTAAGCTGAT ATTTGACACC ATAGAGAGTC GCACGAATCA CTTAAGTCAG
TTTATTTTCA ATTATGCGCG CTTTGCTAAA CTGCCTTTAC CACAGCGGCG TGAGGTGCAG
TGGCAGCAGC TTGTCGAGCA TTTAACCCAG CATTATCCTT TTACCTTAGC CAATGAGTTG
CCCGCTGAAA TGGGTTATTT CGACCAAGGG CAAATGGAAC AAGTCCTGCT GAATTTACTG
AAAAATGCCC ATGAATCAGG TTCCAATCCC GATGAAGTCA CTCTCTCGAT TCGTCACCAA
ACCATGGTGG ATGGGGCGGG CTTTAGTATC AAAATCGAGG ATCGCGGCAG CGGTATGTCC
GAGGAAGTGT TAGAGCAAGC CCTATTGCCC TTTTACTCGA CTAAACAATC GGGTACTGGC
TTAGGCTTAC CCCTTTGCCG CGAAATTATC GAAGCCCACG ATGGCAGCAT TAGCATGCAT
AATCGCAGCG ACGGCGGCCT GTCGGTACAT TTGTGGCTGC CGCAATAA
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| Protein sequence | MLLRTKLIIY STVCCALGVL LTLGAMSYRS SVSSLVEDAP HTLPDITVPE LDLAQLEDAV
AAIESTIKDT EQFQKALSLQ ERLKTEQIKH ELQKLEQLKQ EQVQIKLYKL DRLKDGLFSP
APHPIEAPPM VAPVEPVIPA EFSLSEQTQS MPAVFDMLLI LLLACGSCAL GVAWFTRHLA
RSLNALEVGL LNFNDNDFSV SIPANGEGQL KALAELFNDS AAKLRQERQY IYQRELLLDK
VIQSSPNVML LFNDHQKLMY ANDAARHLFH IKGKMEGLSL DELLQDLPEA LALALKQEKS
GLFTMGEDDT ETWYLSRGQF LLNNQQHNLI LLKQMTRELN RQEVAVWKKV IRIISHELNN
SVAPIASMVN SGRLLTKDLD NPKLKLIFDT IESRTNHLSQ FIFNYARFAK LPLPQRREVQ
WQQLVEHLTQ HYPFTLANEL PAEMGYFDQG QMEQVLLNLL KNAHESGSNP DEVTLSIRHQ
TMVDGAGFSI KIEDRGSGMS EEVLEQALLP FYSTKQSGTG LGLPLCREII EAHDGSISMH
NRSDGGLSVH LWLPQ
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