Gene Shewmr7_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3148 
Symbol 
ID4257102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3726472 
End bp3726903 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content50% 
IMG OID638123832 
ProductUspA domain-containing protein 
Protein accessionYP_739189 
Protein GI114048639 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAG GTCAAATACT CTGGCCCACC GATTTTTCGG AAACTGCGGC CCATGCGCTA 
CGTTATGCTA TTGAAATGGC AAATCTATAC CATGTAGGGC TAAAGATTTT ACACGTTGTA
GAGCAACCCT TGGGTGACGA AAACTATATG ATCTTAGCGA TCACGCCAGA AGAGCTCGCT
AAGAGTATGG AAGAAGCCGC CGCAACTAAG ATGCAGGCTT TACTCGAGGG CCTTAAAACC
GAATTACCTA TCACGACCTT AATTCGCCGT GGCGATCCCG TCGATCAGAT CCTCGAAGAG
GCGAACGGTA AGGATGTTGG CATGGTAGTG ATTGCCAGCC ATGGCAGGAC GGGGATCTCG
CACTTTTTAC ATACCAATGT CGCCGAGGCC GTTGCCAATG GCGCCGCATG CCCCGTACTG
GTAGTAAAAT AA
 
Protein sequence
MRSGQILWPT DFSETAAHAL RYAIEMANLY HVGLKILHVV EQPLGDENYM ILAITPEELA 
KSMEEAAATK MQALLEGLKT ELPITTLIRR GDPVDQILEE ANGKDVGMVV IASHGRTGIS
HFLHTNVAEA VANGAACPVL VVK