Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3148 |
Symbol | |
ID | 4257102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3726472 |
End bp | 3726903 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123832 |
Product | UspA domain-containing protein |
Protein accession | YP_739189 |
Protein GI | 114048639 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCAG GTCAAATACT CTGGCCCACC GATTTTTCGG AAACTGCGGC CCATGCGCTA CGTTATGCTA TTGAAATGGC AAATCTATAC CATGTAGGGC TAAAGATTTT ACACGTTGTA GAGCAACCCT TGGGTGACGA AAACTATATG ATCTTAGCGA TCACGCCAGA AGAGCTCGCT AAGAGTATGG AAGAAGCCGC CGCAACTAAG ATGCAGGCTT TACTCGAGGG CCTTAAAACC GAATTACCTA TCACGACCTT AATTCGCCGT GGCGATCCCG TCGATCAGAT CCTCGAAGAG GCGAACGGTA AGGATGTTGG CATGGTAGTG ATTGCCAGCC ATGGCAGGAC GGGGATCTCG CACTTTTTAC ATACCAATGT CGCCGAGGCC GTTGCCAATG GCGCCGCATG CCCCGTACTG GTAGTAAAAT AA
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Protein sequence | MRSGQILWPT DFSETAAHAL RYAIEMANLY HVGLKILHVV EQPLGDENYM ILAITPEELA KSMEEAAATK MQALLEGLKT ELPITTLIRR GDPVDQILEE ANGKDVGMVV IASHGRTGIS HFLHTNVAEA VANGAACPVL VVK
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