Gene Shewmr7_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3133 
Symbol 
ID4255108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3710415 
End bp3711965 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content49% 
IMG OID638123817 
Productpeptidase S10, serine carboxypeptidase 
Protein accessionYP_739174 
Protein GI114048624 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2939] Carboxypeptidase C (cathepsin A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.631529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCGC TAACAGAGAA GCAAACGCCC TCAAGGCTGA AATGGGCAAG TGTGTTGCTG 
CCCTTGTTAT TCACTGTGTC CATAGTAGGT CATGCCGAGC CCGCGCAAAA AAGCGAAGCT
AAAGTGGATA AGCTAGTGCC AGAGGTGGTG ACGACTAAGC ACAGAATGAC GATTCAAAAT
CAGAAGATCA GTTATCAAGC CATTAGTGGA GAAACCATTT TAGAGGATGA TAAGGGTGAG
CCTCAGGCGA GTATCTTCTC TATTACGTAT TTACGGGATG ATGTGCAGGA CAGTAGTAAA
CGCCCTGTCA CGTTTATTTT TAACGGTGGC CCAGGTTCAG CCTCGCTGTG GCTGCACATG
GGCCTCTTTG GCCCAAAACG TGTGATTGTG CCCGGTGATG CCAAAGATGA TGGTGCAGCG
CCTTATCGGA TTGAAGCCAA CGATTACTCC TTACTCGATG AGTCTGACTT AGTGTTTATC
GACCCTGTGG GTACTGGTTT TAGTCGTGCC CTCGGAGAGA AGAAAGGTGC CGATTTTTGG
GGCGTGAAAG AAGATGCCCA ATCCATTGCC GAGTTTATGC GCCGTTGGTT GATTGAACAT
AAGCGTTGGA ATTCACCCAA GTATCTTGCC GGTGAAAGTT ATGGTACGAC ACGAGCCGCA
GCATTAGTGG ATGAGCTCCA AGGCGGTTGG ACCGATATCT CAGTCAATGG CGTGATGCTG
ATTTCATCGA TTCTCGACTT TAGCCACGCT CGCTATCAAC CGGGCAATAA CCAACCCTAC
ATTGGTTTTT TACCGACTAT GGCGTCAACC GCTTTTTATC ATAATAAAGT TAGTGATGCC
GACAAGGCCT TAGGGCTTGA AGCGTTTGTC GAACAGGCGC GTCAATTCGC AATTAAGGAT
TACGCCTTAG CCCTATTGCA GGGTAGCCGT TTAGCGCAAA GCGATTATCT GAGCGTACGC
AAACAGTTGG CGCGTTTTAC GGGCCTGAGT GAGTCTTATC TTGACCGAGT GAATTTGCGG
GTGAGTGCGA GTCGCTACAC CAAAGAATTG CTCAGGGATC AGGATTTGAC CGTCGGGCGG
TTAGACAGTC GTTATACCGG CAAAGATTAC GACAGTGGCG GTGACTCGAC CGATAACGAC
CCGTCAGGAT ATGGTATCGA TGGCGCTTAT ACGGCGGCTA TCCATCAGTA TCTGTATGAG
GATTTAGGGG TTAAATTATC ACGCCCCTTC AACGTGCTCT CCACCGATGT TAACCGTGGC
TGGAACTGGA ATATCAGCGG TAAGCAAATG CATTATGTGA ATGTGGCACC CTATTTAGGG
CAGGCGCAGC GCGAGAATAA AGACCTACGC ATTTTTGTCG GTAACGGTTA TTTCGATTTT
GCGACGCCCT TCTTTGCGAC CGAAAATACC TTTGCCGATA ATGGCATAGA TAATAGCCGT
GTCACTATGC ATTACTACAA AGCGGGTCAT ATGATGTATG TGGAGCCCGC GTCGCTTGCA
CAACTAGTGC AAGATATCCG CGCTTTTTAT CATCCTAACG CGGCTAAATG A
 
Protein sequence
MRALTEKQTP SRLKWASVLL PLLFTVSIVG HAEPAQKSEA KVDKLVPEVV TTKHRMTIQN 
QKISYQAISG ETILEDDKGE PQASIFSITY LRDDVQDSSK RPVTFIFNGG PGSASLWLHM
GLFGPKRVIV PGDAKDDGAA PYRIEANDYS LLDESDLVFI DPVGTGFSRA LGEKKGADFW
GVKEDAQSIA EFMRRWLIEH KRWNSPKYLA GESYGTTRAA ALVDELQGGW TDISVNGVML
ISSILDFSHA RYQPGNNQPY IGFLPTMAST AFYHNKVSDA DKALGLEAFV EQARQFAIKD
YALALLQGSR LAQSDYLSVR KQLARFTGLS ESYLDRVNLR VSASRYTKEL LRDQDLTVGR
LDSRYTGKDY DSGGDSTDND PSGYGIDGAY TAAIHQYLYE DLGVKLSRPF NVLSTDVNRG
WNWNISGKQM HYVNVAPYLG QAQRENKDLR IFVGNGYFDF ATPFFATENT FADNGIDNSR
VTMHYYKAGH MMYVEPASLA QLVQDIRAFY HPNAAK