Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3133 |
Symbol | |
ID | 4255108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3710415 |
End bp | 3711965 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123817 |
Product | peptidase S10, serine carboxypeptidase |
Protein accession | YP_739174 |
Protein GI | 114048624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.631529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGCGC TAACAGAGAA GCAAACGCCC TCAAGGCTGA AATGGGCAAG TGTGTTGCTG CCCTTGTTAT TCACTGTGTC CATAGTAGGT CATGCCGAGC CCGCGCAAAA AAGCGAAGCT AAAGTGGATA AGCTAGTGCC AGAGGTGGTG ACGACTAAGC ACAGAATGAC GATTCAAAAT CAGAAGATCA GTTATCAAGC CATTAGTGGA GAAACCATTT TAGAGGATGA TAAGGGTGAG CCTCAGGCGA GTATCTTCTC TATTACGTAT TTACGGGATG ATGTGCAGGA CAGTAGTAAA CGCCCTGTCA CGTTTATTTT TAACGGTGGC CCAGGTTCAG CCTCGCTGTG GCTGCACATG GGCCTCTTTG GCCCAAAACG TGTGATTGTG CCCGGTGATG CCAAAGATGA TGGTGCAGCG CCTTATCGGA TTGAAGCCAA CGATTACTCC TTACTCGATG AGTCTGACTT AGTGTTTATC GACCCTGTGG GTACTGGTTT TAGTCGTGCC CTCGGAGAGA AGAAAGGTGC CGATTTTTGG GGCGTGAAAG AAGATGCCCA ATCCATTGCC GAGTTTATGC GCCGTTGGTT GATTGAACAT AAGCGTTGGA ATTCACCCAA GTATCTTGCC GGTGAAAGTT ATGGTACGAC ACGAGCCGCA GCATTAGTGG ATGAGCTCCA AGGCGGTTGG ACCGATATCT CAGTCAATGG CGTGATGCTG ATTTCATCGA TTCTCGACTT TAGCCACGCT CGCTATCAAC CGGGCAATAA CCAACCCTAC ATTGGTTTTT TACCGACTAT GGCGTCAACC GCTTTTTATC ATAATAAAGT TAGTGATGCC GACAAGGCCT TAGGGCTTGA AGCGTTTGTC GAACAGGCGC GTCAATTCGC AATTAAGGAT TACGCCTTAG CCCTATTGCA GGGTAGCCGT TTAGCGCAAA GCGATTATCT GAGCGTACGC AAACAGTTGG CGCGTTTTAC GGGCCTGAGT GAGTCTTATC TTGACCGAGT GAATTTGCGG GTGAGTGCGA GTCGCTACAC CAAAGAATTG CTCAGGGATC AGGATTTGAC CGTCGGGCGG TTAGACAGTC GTTATACCGG CAAAGATTAC GACAGTGGCG GTGACTCGAC CGATAACGAC CCGTCAGGAT ATGGTATCGA TGGCGCTTAT ACGGCGGCTA TCCATCAGTA TCTGTATGAG GATTTAGGGG TTAAATTATC ACGCCCCTTC AACGTGCTCT CCACCGATGT TAACCGTGGC TGGAACTGGA ATATCAGCGG TAAGCAAATG CATTATGTGA ATGTGGCACC CTATTTAGGG CAGGCGCAGC GCGAGAATAA AGACCTACGC ATTTTTGTCG GTAACGGTTA TTTCGATTTT GCGACGCCCT TCTTTGCGAC CGAAAATACC TTTGCCGATA ATGGCATAGA TAATAGCCGT GTCACTATGC ATTACTACAA AGCGGGTCAT ATGATGTATG TGGAGCCCGC GTCGCTTGCA CAACTAGTGC AAGATATCCG CGCTTTTTAT CATCCTAACG CGGCTAAATG A
|
Protein sequence | MRALTEKQTP SRLKWASVLL PLLFTVSIVG HAEPAQKSEA KVDKLVPEVV TTKHRMTIQN QKISYQAISG ETILEDDKGE PQASIFSITY LRDDVQDSSK RPVTFIFNGG PGSASLWLHM GLFGPKRVIV PGDAKDDGAA PYRIEANDYS LLDESDLVFI DPVGTGFSRA LGEKKGADFW GVKEDAQSIA EFMRRWLIEH KRWNSPKYLA GESYGTTRAA ALVDELQGGW TDISVNGVML ISSILDFSHA RYQPGNNQPY IGFLPTMAST AFYHNKVSDA DKALGLEAFV EQARQFAIKD YALALLQGSR LAQSDYLSVR KQLARFTGLS ESYLDRVNLR VSASRYTKEL LRDQDLTVGR LDSRYTGKDY DSGGDSTDND PSGYGIDGAY TAAIHQYLYE DLGVKLSRPF NVLSTDVNRG WNWNISGKQM HYVNVAPYLG QAQRENKDLR IFVGNGYFDF ATPFFATENT FADNGIDNSR VTMHYYKAGH MMYVEPASLA QLVQDIRAFY HPNAAK
|
| |