Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3126 |
Symbol | |
ID | 4255101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3705127 |
End bp | 3706122 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123810 |
Product | trans-hexaprenyltranstransferase |
Protein accession | YP_739167 |
Protein GI | 114048617 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000273118 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAC AACCAGAGTC TATTATGGAT TTAAACGCTA TTCGTCAACT GGCTGACACT GATATGCAAG CAGTCAATCA GCTGATCTAT AAACAGCTGG AGTCAGATGT CGCCCTGATT AACCAGTTAG GTTTCTACAT TATTAATGGT GGTGGTAAAC GTCTTCGTCC TTTACTGTCC GTCCTCGCAG CGCGCGCAGT CGACTATCAA GGTGAAGCCC ACCTTAAGCT TGCCGCGATT ATTGAATTTA TTCATACCGC TTCATTACTG CACGATGATG TGGTCGATGA ATCGACCCTC AGACGTGGCC GCGAAACCGC CAACGCACTC TTTGGTAACA GCGCCAGTGT ACTAGTTGGT GACTTCCTTT ATACCCGCTC ATTCCAAATG ATGACCGAAC TCGACAGCAT GCGAGTACTG CGTGTATTAG CCGATACAAC TAACGTATTG GCCGAAGGTG AAGTATTACA GCTAATGAAC TGTAACGACC CTAATACCAC AGAAGAAAGC TATATGCGGG TGATCTATTG CAAGACCGCT AAGCTATTCG AAGCCGCCAC GTTACTGGCC GCGGTATTAG CCGGCGCCAC ACCCGAGCAA GAAACCGCAT TAGGCGACTA TGGCAAATAT TTAGGTACAG CATTCCAGTT GACCGACGAT TTGCTCGACT ACACCGCCGA CAGTGAAGAG TTAGGTAAAA ACATCGGTGA TGATCTCGCT GAAGGTAAAC CGACCTTACC GCTGATCTAT GCCATTGCCC ATGGCACAGA AGAAGAGCAG CAACTCATTC GCCAAGCCAT TGAGCAAGGT GATGGCACCC ACGCCATTGA GAAAATTGTT GCCGCTCTGC ATCACTGCGG CGCGCTCACT TACACTCAGC AAAAAGCCAT TGAAGAATCC AACAAGGCGA TTGCAGCGTT GTCGGTATTA CCTGACAGTA ACTTCAAAAC CGCATTAATT TCGCTGGCAA AAATCTCCGT TGATCGTAAC CACTAA
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Protein sequence | MAPQPESIMD LNAIRQLADT DMQAVNQLIY KQLESDVALI NQLGFYIING GGKRLRPLLS VLAARAVDYQ GEAHLKLAAI IEFIHTASLL HDDVVDESTL RRGRETANAL FGNSASVLVG DFLYTRSFQM MTELDSMRVL RVLADTTNVL AEGEVLQLMN CNDPNTTEES YMRVIYCKTA KLFEAATLLA AVLAGATPEQ ETALGDYGKY LGTAFQLTDD LLDYTADSEE LGKNIGDDLA EGKPTLPLIY AIAHGTEEEQ QLIRQAIEQG DGTHAIEKIV AALHHCGALT YTQQKAIEES NKAIAALSVL PDSNFKTALI SLAKISVDRN H
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