Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3122 |
Symbol | |
ID | 4255097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3702129 |
End bp | 3702890 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123806 |
Product | hypothetical protein |
Protein accession | YP_739163 |
Protein GI | 114048613 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.165656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTCGC ACAACTGCTA CTGGCCTACG GTGCTGAATC TGATTTAGTT GAAGAAATCA GCCAGCGCCT AGGTCAGGCC TTAGGATTGG CAAGTGTTGA GCTTTCCATC TCCTCTAATT CCCTCGTGTT AACCAGTTTA GTGCATGGTC GCTGTATCAC GACGACGCGT CGGATCCGCG AGCATGGCAT CAATATGACC ATTGTCTGCG AGTTGCAGCG CATCTGTTTG TTGGCGGAAA AAGGTCTCTA TGGCCCCAAC GAAGTGCGTA AACGCTTAGC GCGGATTGAA CCTAAGACTT ATCCGCCGTA TCTCGTGATC TTGATGATAG GCCTGTCCTG CGCCAGTTTT TGTCACCTGT TTAATGGCGA TGTTGCCGCA TCAGTCATCA CCTTTTTTGC CTCCGCGGTC GGGATGTCGG TGCGCCTTGC GATTGCCAAG CGGCATTTTA ATTTGCTGGT CAATTTTGCG GTGACGGCAT TCGTCACTAG CATGCTGGCG CAGACGGGTT ATGTATTTCA CTTGAGTGAA ACCCCGCAGG CGGCCATGGC GGCCAGTGTG TTGATGCTGG TGCCGGGGTT CCCGATGATC AATGCGATTT CTGATATGGT CAAAGGCCAT ATGAACGTGG GCATTTCCCG TTGGGGTCAT GCCACCTTGC TCACAGTGTC ATCCGTTATC GGCATCACCA TTGCGATGCA GATTGGGGGG ATCTTCCTAT GA
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Protein sequence | MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPYLVI LMIGLSCASF CHLFNGDVAA SVITFFASAV GMSVRLAIAK RHFNLLVNFA VTAFVTSMLA QTGYVFHLSE TPQAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI GITIAMQIGG IFL
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