Gene Shewmr7_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3122 
Symbol 
ID4255097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3702129 
End bp3702890 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID638123806 
Producthypothetical protein 
Protein accessionYP_739163 
Protein GI114048613 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.165656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTCGC ACAACTGCTA 
CTGGCCTACG GTGCTGAATC TGATTTAGTT GAAGAAATCA GCCAGCGCCT AGGTCAGGCC
TTAGGATTGG CAAGTGTTGA GCTTTCCATC TCCTCTAATT CCCTCGTGTT AACCAGTTTA
GTGCATGGTC GCTGTATCAC GACGACGCGT CGGATCCGCG AGCATGGCAT CAATATGACC
ATTGTCTGCG AGTTGCAGCG CATCTGTTTG TTGGCGGAAA AAGGTCTCTA TGGCCCCAAC
GAAGTGCGTA AACGCTTAGC GCGGATTGAA CCTAAGACTT ATCCGCCGTA TCTCGTGATC
TTGATGATAG GCCTGTCCTG CGCCAGTTTT TGTCACCTGT TTAATGGCGA TGTTGCCGCA
TCAGTCATCA CCTTTTTTGC CTCCGCGGTC GGGATGTCGG TGCGCCTTGC GATTGCCAAG
CGGCATTTTA ATTTGCTGGT CAATTTTGCG GTGACGGCAT TCGTCACTAG CATGCTGGCG
CAGACGGGTT ATGTATTTCA CTTGAGTGAA ACCCCGCAGG CGGCCATGGC GGCCAGTGTG
TTGATGCTGG TGCCGGGGTT CCCGATGATC AATGCGATTT CTGATATGGT CAAAGGCCAT
ATGAACGTGG GCATTTCCCG TTGGGGTCAT GCCACCTTGC TCACAGTGTC ATCCGTTATC
GGCATCACCA TTGCGATGCA GATTGGGGGG ATCTTCCTAT GA
 
Protein sequence
MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL 
VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPYLVI
LMIGLSCASF CHLFNGDVAA SVITFFASAV GMSVRLAIAK RHFNLLVNFA VTAFVTSMLA
QTGYVFHLSE TPQAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI
GITIAMQIGG IFL