| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3110 |
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| Symbol | |
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| ID | 4257151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3689377 |
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| End bp | 3690045 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638123794 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_739151 |
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| Protein GI | 114048601 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCA TGATCCTCGC GGCAGGCAGG GGAGAGCGTT TACGCCCCTT GACCGACACC
CTGCCCAAAC CTTTAGTGCC CGTCTTAGGT AAACCGCTGA TTGTGTACCA TATTGAGAAG
TTGGCCGCGG CGGGTATCGT CGATATCGTG ATAAATCACG CTTGGCTTGG GCACAAGCTG
GTCGAAACCC TAGGCGATGG TCAGGCCTTT GGGGTCAAGA TCCAATATAG CGCCGAAGCA
TCGGCCCTCG AGACCGGTGG CGGAATTAAG CAGGCATTGC CCCTGCTGAC TGACGGCGAC
TCGGATGCAC CGTTTTTAGT GCTCAATGGC GATGTGTTTA TCGATGCCTT GCCGACGATT
GCTCCCTTAG CGGATACTGC TCAAGCGCAT TTATGGTTGG TGCCAAATCC AGAGCAACAT
CCTAACGGCG ACTTTGCCTT GGAACAGGGC CTTGTACGTG AACAGGGTGA GCAAAAATAT
ACTTTCTCTG GCATGGGCTT ATATCGCCCA TCATTATTTG ACGGCACGCC GGATGGTGCC
TTTGCCCTTG GGCCTTTGCT GCGGGCTAAA ATGGCCGATG GCCTGATCAC TGGAGCACAC
TTTAATGGAC TCTGGTGCGA TGTTGGGACG ATTCCACGTC TGCAAGCATT AGAGTCAGCG
CTGGCGTAA
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| Protein sequence | MKAMILAAGR GERLRPLTDT LPKPLVPVLG KPLIVYHIEK LAAAGIVDIV INHAWLGHKL
VETLGDGQAF GVKIQYSAEA SALETGGGIK QALPLLTDGD SDAPFLVLNG DVFIDALPTI
APLADTAQAH LWLVPNPEQH PNGDFALEQG LVREQGEQKY TFSGMGLYRP SLFDGTPDGA
FALGPLLRAK MADGLITGAH FNGLWCDVGT IPRLQALESA LA
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