Gene Shewmr7_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3109 
SymboldjlA 
ID4257150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3688495 
End bp3689283 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID638123793 
ProductDna-J like membrane chaperone protein 
Protein accessionYP_739150 
Protein GI114048600 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0792555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTT GGGGTAAGTT TTTTGGATTT GTTATCGGGT TTATGTTTGG CCGTATTTTC 
GGTGCGCTAC TGGGTTTATG GCTTGGGCAT CTCTACGATA AACGCGCCGG TGGTGGCGCT
AGTTTTAGTC AGATCTTAGG TCAGGCCAAG AATCGACAGG GGATATTCTT TAACACCACC
TTCGCCGTAA TGGGCCGTGT GGCCAAGGCG TCGGGTCGAG TGACTGAGAC CGATATTCGT
ATCGCGACTA TATTGATGGA CCAGATGCGC TTAACGGGTG AAGCCCGTAA AGAGGCGCAG
CAGGCATTCC GTCAGGGTAA AGAGCCAGAC TTTGACCTTC GCAGCAGTCT GCAGGCCTTT
CGCGCCGTGA CCCAAGGTCG CCAAGAACTG GTGCAAATGT TTATTGAGAT CCAAATTCAA
ACCGCCTTAT CGGACGGTGA GCTCGATCCC GCTGAGCATG CAATCCTGAT GACGGTGGCC
CAAGAGTTAG GTTATGGTCG TGGGCAACTC GATGAATTAC TTAAACGTTG GCAAGCGGAA
TACCGTTTCC ACCAGACCTC TAATGGCAAT AAAACCTCGA TTACCGACGC CTATAATTTA
CTTGGCATTA ATGCCGAGGC GACGGATCAA GAGGTGAAAA GGGCTTATCG CAAGTTGATG
AATGAACACC ATCCCGATAA GTTAATCGCT AAGGGATTAC CACCCGAGAT GATGGAAATT
GCCAATCGTA AAGCGCAGGA CATCCAAGCT GCGTACGACA GGGTGAAATC GGAGCGCGGC
ATGCGCTAA
 
Protein sequence
MRLWGKFFGF VIGFMFGRIF GALLGLWLGH LYDKRAGGGA SFSQILGQAK NRQGIFFNTT 
FAVMGRVAKA SGRVTETDIR IATILMDQMR LTGEARKEAQ QAFRQGKEPD FDLRSSLQAF
RAVTQGRQEL VQMFIEIQIQ TALSDGELDP AEHAILMTVA QELGYGRGQL DELLKRWQAE
YRFHQTSNGN KTSITDAYNL LGINAEATDQ EVKRAYRKLM NEHHPDKLIA KGLPPEMMEI
ANRKAQDIQA AYDRVKSERG MR