Gene Shewmr7_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3107 
Symbol 
ID4257148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3686796 
End bp3687749 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content52% 
IMG OID638123791 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 
Protein accessionYP_739148 
Protein GI114048598 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.583334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG TCGTACTCGA TGGTGAAACC TTAAACCCTG GGGATTTAAC TTGGCAAGCG 
GTCAGCGCAT TAGGGGAATT TAGCTGTTTT GCCCGCACGC CTTTGGCGGA GATTATCCCC
CGCGCTCAGG ATGCCGAAAT TGTGCTCACC AACAAGACGC CCCTCGATGC CAACACCTTA
GCCCAACTGC CTAAGCTTAA ATATATCGGT GTGCTCGCCA CGGGCACTAA CGTGGTGGAT
CTTGCCGCCG CAAAAGAGTT AGGCATAGTG GTTACCAACG TGCCGGCCTA TGGCCCCGAT
GCCGTCGCAC AAATGGTGTT TGCCCATATT TTGCATCACA CGCAAGCCGT TGCGGCGCAC
CATCAAGCCG TTGCCGCAGG GCAGTGGAGC AATTGCAGTG ACTTTTGTTT TACCCTAATG
CCGCTGCAAT CCCTTAAAGG CAAAACCTTA GGCTTGATTG GTTATGGGGA TATTGGCCAG
CAGGTGGCTA AACTCGCCTT AGCCTTTGGC ATGAAGGTAT TAGTGAATAC CCGCACCAAA
CCTAGCGATT TACCCCAAGG CGTGAGTTGG ACATCCCGCG ATACGGTATT CAAGGAGTCC
GATATTCTCT CGCTCCATTG TCCATTCACC CCTGAGACCA CCGAGCTAAT TAACACTCAA
ACCCTCGAAT TAATGAAGCC GCAGGCGTTA CTGATCAACA CCGCACGCGG CGGCTTAATC
GATGAGGCGG CGCTTGCGGC CGCATTAACG CAGGGCAAAG TTTTTGCCGG CGTCGATGTA
CTCTCGACCG AACCACCGAG TGCGGATAAT CCGCTACTAA CAGCGCCCAA TATCAGTATC
AGTCCCCACA ATGCTTGGGC GACCAAAGAA GCGCGGCAGA ACTTACTTAA TATCGCAACG
GCAAATCTCA GCGCTTATTT AGCTGGCGAT AGAGTTAATT GGGTGAATCC ATAA
 
Protein sequence
MKIVVLDGET LNPGDLTWQA VSALGEFSCF ARTPLAEIIP RAQDAEIVLT NKTPLDANTL 
AQLPKLKYIG VLATGTNVVD LAAAKELGIV VTNVPAYGPD AVAQMVFAHI LHHTQAVAAH
HQAVAAGQWS NCSDFCFTLM PLQSLKGKTL GLIGYGDIGQ QVAKLALAFG MKVLVNTRTK
PSDLPQGVSW TSRDTVFKES DILSLHCPFT PETTELINTQ TLELMKPQAL LINTARGGLI
DEAALAAALT QGKVFAGVDV LSTEPPSADN PLLTAPNISI SPHNAWATKE ARQNLLNIAT
ANLSAYLAGD RVNWVNP