| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3096 |
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| Symbol | |
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| ID | 4256441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3672338 |
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| End bp | 3673483 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123780 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_739137 |
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| Protein GI | 114048587 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.156806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC TATTGATATT AACCTATGCC TCGATCTGTA TTGTGATTTT TAAAGTCTTT
AAGATCCCGA TGAACAAATG GACAGTGCCC ACGGCGGTAT TAGGGGGCGT GGTCCTTATC
GGGGCGTTGT TGCTGATTAT GAACTACAAC CATCCCTATT CACGTTTTGC GCGGGAATAC
TATGCCACTA TTCCAATCAC TCCAGCGGTA AAAGGGTTAG TGATTTCGGT GGACGTTAAG
CCTAATACGC CGATTAAACA AGGGGATGTG CTGTTTCGAA TCGATCCCAC TCCCTTTGAA
GCCGTGGTTA AACGCAAAAG AGCCGCTCTG TTAGCGGCGG AGCAGGAAGT GCCACAACTT
GAGGCCGCTT GGGAGTCTGC CAAGGCGAAT GTGGCCAGAG TGGCAGCGGA TAGGGAACGT
AATAAATCGG CCTATGACCG TTATGAGCAA GGCCACCGCA AAGGTGGGGC GAACTCACCC
TTCACAGCGC TGGAATTAGA TAACAGACGC CAACTGTTTT TAGCCTCAGA GGCTCAGCTA
ACGGCTGCGC AGGCCGAAGA GTTACGCGCA CGTCTTGCCT ATGAGTCCAA TGTGGATGGG
GTCAATTCTA AAGTGGCGGG ACTACAAGGT GACCTTGAAA GTGCGCTCTA TAATCTCGAG
CAAACCGTCG TGCGGGCACC AGCCGATGGT ATTGTGACTC AAATGGCGCT GCGCCCAGGT
GCAATGGCGG TGCCTTTGCC TTTACGGCCG GTGATGAGTT TTATCCCCGA CGAGCAGCGT
TATTTTGCTG GCGCATTCTG GCAAAACTCC CTACTGCGAT TACAGGAAGG GGATGAGGCG
GAAGTGGTAT TAGATGCGGC GCCTGGACAA GTGTTTAAAG GTAAAGTCGC TAAGGTACTC
CCCGCGATGG CCGAAGGCGA GATCCAGATG AATGGCACGC TGCAATCGTC CAATCAGCTA
TTCCAAACAG GGCGGGTTAT CGTGTTAATC GATATTGAAG ACGATGCGAT ACGCCGCCAA
TTCCCAGCGG GCGTTGCGGG ACAAGTGGCT GTGTACACTG AACATTTCCA TCATGTCGCC
GTGATGCGTA AAGTGCTGCT GCGGATGCAG GGCTGGTTAA ACTATCTGTT CTTCGATGGG
CACTAG
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| Protein sequence | MDLLLILTYA SICIVIFKVF KIPMNKWTVP TAVLGGVVLI GALLLIMNYN HPYSRFAREY
YATIPITPAV KGLVISVDVK PNTPIKQGDV LFRIDPTPFE AVVKRKRAAL LAAEQEVPQL
EAAWESAKAN VARVAADRER NKSAYDRYEQ GHRKGGANSP FTALELDNRR QLFLASEAQL
TAAQAEELRA RLAYESNVDG VNSKVAGLQG DLESALYNLE QTVVRAPADG IVTQMALRPG
AMAVPLPLRP VMSFIPDEQR YFAGAFWQNS LLRLQEGDEA EVVLDAAPGQ VFKGKVAKVL
PAMAEGEIQM NGTLQSSNQL FQTGRVIVLI DIEDDAIRRQ FPAGVAGQVA VYTEHFHHVA
VMRKVLLRMQ GWLNYLFFDG H
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