Gene Shewmr7_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3094 
Symbol 
ID4256439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3670218 
End bp3671087 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content52% 
IMG OID638123778 
Productsulfate ABC transporter, inner membrane subunit CysW 
Protein accessionYP_739135 
Protein GI114048585 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.291576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAT TTAAACCGTT AAGAGTCGGT GAAGCGCCCC TTATCAAATG GAGCCTAATC 
ACCCTAGCCG TGTTTTTGGC CATGGTGTTG TTGCTGCTGC CCTTAGTCAG TATTTTCCAG
CAGGCCTTCG TCGGTGGTTG GGAGCGTTAT ATCGAGCATC TGAGCCAACC AGACTCACTC
CACGCCATCG GGCTGACCCT GATGGTTGCA GCGCTGACCG TGCCGATTAA CTTAGTGTTT
GGGGTTCTGC TCGCCTGGAG CGTAACGCGC TTTGAGTTTC CGGGGCGTAA GTTACTCATT
ACCTTGATTG ATATTCCCTT TGCCGTATCG CCCGTGGTCG CAGGCTTGCT CTATCTACTG
CTTTACGGCA ACAGTGGCTG GCTCGGTGCT TGGCTATTTG AGCACGATTT ACAGATCATG
TTTGCCTGGC CGGGAATTCT GTTAGTCACC ATTTTCGTGA CCTGCCCCTT TGTTGCCCGA
GAATTAATCC CCTTGATGCA GCAACAAGGC GCATCGGAGG AGGAAGCCGC AGTCATTCTT
GGCGCTTCAT GGTGGCAACT GTTTCGCCGC GTGACTCTGC CCAATATTAA GTGGGCACTG
ATTTATGGGG TGATCCTCAC CAACGCCAGA GCCGTAGGTG AGTTTGGTGC CGTTGCCGTA
GTATCTGGCA ATATCCGTGG TGAAACCAAC ACCTTACCTT TGCATGTGCA ATTACTTTAC
GAAGATTATC AGGCCGAAGC CGCCTTCGCG AGCGCGTCAC TGCTTGCCTT GATCGCCCTA
TGTACCTTAC TGCTAAAAGC CTTAGTAGAG TGGCGCCAAC AACGCAGCTT ATCCGCCAAT
GACAACCAAG AGCAGAGCCA ATCATTATGA
 
Protein sequence
MNSFKPLRVG EAPLIKWSLI TLAVFLAMVL LLLPLVSIFQ QAFVGGWERY IEHLSQPDSL 
HAIGLTLMVA ALTVPINLVF GVLLAWSVTR FEFPGRKLLI TLIDIPFAVS PVVAGLLYLL
LYGNSGWLGA WLFEHDLQIM FAWPGILLVT IFVTCPFVAR ELIPLMQQQG ASEEEAAVIL
GASWWQLFRR VTLPNIKWAL IYGVILTNAR AVGEFGAVAV VSGNIRGETN TLPLHVQLLY
EDYQAEAAFA SASLLALIAL CTLLLKALVE WRQQRSLSAN DNQEQSQSL