Gene Shewmr7_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3093 
Symbol 
ID4256438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3669363 
End bp3670208 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content52% 
IMG OID638123777 
Productsulfate ABC transporter, inner membrane subunit CysT 
Protein accessionYP_739134 
Protein GI114048584 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.369613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.149615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATTTA ATAATGGGCG CTTACGCCAC AAGCGGGTTT TGCCAGGGTT TAGTATCAGC 
CTAGGTGTGT CTTTGCTGTT TGTCAGCTTG ATTCTCTTAC TCCCCACCAC AGGCCTGATT
ATGCAAACCA GCCAGATGAG CTGGGCAGAA TATTGGGGCG TGATTGCCGA TCCCCGCGTG
CTGGCAAGTT ATAAAGTCAC TATTTTATCT GCACTGGTCG CCTCCCTGTT TAACTGTCTT
TTTGGCCTGT TACTCGCCTG GGTGTTGGTG CGTTATGAGT TTCCGGGTAA GCGCATCCTC
GATGCCTTAG TCGATTTACC CTTTGCCTTA CCCACAGCCG TCGCGGGTAT CACCTTAGCG
ACCCTGTACG CCGAGAATGG CCAGATTGGT AGCCTGTTGG CCGAAATCGG TATTAAAGTG
GCCTACACGC CATTGGGGAT TGTGGTTGCG ATGATCTTCA CCAGCATTCC CTTCGTGGTG
CGAACCGTTC AGCCCGTATT GGAAGAGTTA TCCCACGATG AAGAAGAAGC CGGCATGACC
TTAGGCGCAA CCGATGGCGC CGTGTTTTGG CGGGTGATTT TACCTTCCCT CTGGCCAGCC
TTAGTGGTTG GCACTGCGCT GTCTTTTACC CGCAGTCTAG GTGAGTTTGG CGCGGTGATT
TTTATCGCAG GCAATATGCC CTATATCAGT GAAATCACCT CCCTGATGAT TTTCGTTCGC
CTACAGGAAT TTGATTTTGC CGGCGCCAGC GCCATTGCCT CCGTTGTACT GCTGACGTCG
CTGTTGCTGC TACTGCTGAT TAACCTGTGG CAGGCGCGTT ATTTACGCCG CATTCACGGC
CGATAA
 
Protein sequence
MIFNNGRLRH KRVLPGFSIS LGVSLLFVSL ILLLPTTGLI MQTSQMSWAE YWGVIADPRV 
LASYKVTILS ALVASLFNCL FGLLLAWVLV RYEFPGKRIL DALVDLPFAL PTAVAGITLA
TLYAENGQIG SLLAEIGIKV AYTPLGIVVA MIFTSIPFVV RTVQPVLEEL SHDEEEAGMT
LGATDGAVFW RVILPSLWPA LVVGTALSFT RSLGEFGAVI FIAGNMPYIS EITSLMIFVR
LQEFDFAGAS AIASVVLLTS LLLLLLINLW QARYLRRIHG R