| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3091 |
|---|
| Symbol | cysM |
|---|
| ID | 4256436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3667086 |
|---|
| End bp | 3667964 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638123775 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_739132 |
|---|
| Protein GI | 114048582 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0134095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.472051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGACT TTCCGACTAT TGAAGCCTGT ATTGGGCAAA CTCCGCTGGT ACGTTTGCAG
CGACTTGATT GTGGTAGCTC AACGGTTTTA TTAAAGCTGG AGGGGAATAA CCCCGCGGGT
TCGGTAAAAG ATCGCGCGGC GCTGAATATG ATTTTTCAGG CGGAGCTTCG CCAAGAGATT
GCCCCTGGGG ATACCCTGAT TGAAGCGACC AGTGGCAATA CGGGTATCGC CTTAGCCATG
GCGGCGGCGA TTAAAGGCTA CAAGATGATC CTGATCATGC CGTCGAATTC GACTCAAGAG
CGTAAGGATG CCATGCAGGC CTATGGCGCC GAGCTGCTGC TGGTGGACAA TATGGAAGCC
GCGCGGGATT TAGCCTTAGA TCTTCAGGCA CAAGGCAAAG GTAAGGTGCT GGATCAGTTC
AATAATCAAG ATAACGCTAA CGCCCATTTT CAGACCACTG GCCCCGAAAT TTGGCAGCAG
AGCCAAGGTA AGATCACTCA CTTTGTCTCT AGCATGGGTA CCACTGGCAC TATTATGGGA
GTGTCGAAAT ACCTAAAGAG CCGCAACCCC GATGTCACCA TTGTCGGGCT ACAACCCGCC
GATGGCAGTT CGATTCCGGG GATCCGCCGC TGGCCACAGG AATATCTACC GGGTATTTTC
GATGCTGCCC GTGTCGATGC CGTGATGGAT ATTGAGGAGC AAGATGCGAA AGCCATGGCA
AGAACCTTGG CCCGTGAAGA AGGTATTTGT GCTGGCGTGA GTTCTGGCGG GGCTGTGTTT
GCGGCGCTCG AGATTGCGAG GCAGAATCCG GGTTCCGTTG TGGTCGCGAT TGTGTGTGAT
AGGGGCGACC GTTATCTGTC ATCTGGGTTA TTTTCTTAA
|
|---|
| Protein sequence | MSDFPTIEAC IGQTPLVRLQ RLDCGSSTVL LKLEGNNPAG SVKDRAALNM IFQAELRQEI
APGDTLIEAT SGNTGIALAM AAAIKGYKMI LIMPSNSTQE RKDAMQAYGA ELLLVDNMEA
ARDLALDLQA QGKGKVLDQF NNQDNANAHF QTTGPEIWQQ SQGKITHFVS SMGTTGTIMG
VSKYLKSRNP DVTIVGLQPA DGSSIPGIRR WPQEYLPGIF DAARVDAVMD IEEQDAKAMA
RTLAREEGIC AGVSSGGAVF AALEIARQNP GSVVVAIVCD RGDRYLSSGL FS
|
|---|
| |