Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3090 |
Symbol | |
ID | 4256435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3666342 |
End bp | 3666869 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123774 |
Product | hypothetical protein |
Protein accession | YP_739131 |
Protein GI | 114048581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00239332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.428293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATACA AAAATATCGC CAGTCTGTTT GTCGCCTTGG TCTTAGTCAG CGCCTGCAGC AGTAAGCCGA AAAACGATTA CGATCTCAAT TACGACTTTA AGGCATTACA GAGTTTCAGC CAGCTCGCTC CCCAACCTAG CGACGACCCA CTCAGCGCCC AGCGCATTCA AACCGAAATC ACCCAACAAT TAAGCCAAAA AGGCTTTACC GAAAATGCCA CTTCCCCCGA TTTTAAAGTC GCCTATGGGT TATTAACCCA AGATAAACCT AAAGACTCGG GTTTATCCAT AGGTTTAGGC ACGGGCAGTT CTGGCGGCAT TGGCGTAGGC ACAAGCGTCG GCGTACCACT TGGCAGTGAC ACGGCAAAAA TTCAAACCAT TCAAATTGAT ATTATCGATA CTAAAACCAA TAAGCTGATT TGGCGCGGCA CAGATAGTTT CGATTTTGAC GGGGGCGGCG ATAAAAAAGC CCAAGACACA GCCAAAGCCG TTAGCCGGAT TTTGGCGCAG TTTCCACCGC AGCCATAA
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Protein sequence | MGYKNIASLF VALVLVSACS SKPKNDYDLN YDFKALQSFS QLAPQPSDDP LSAQRIQTEI TQQLSQKGFT ENATSPDFKV AYGLLTQDKP KDSGLSIGLG TGSSGGIGVG TSVGVPLGSD TAKIQTIQID IIDTKTNKLI WRGTDSFDFD GGGDKKAQDT AKAVSRILAQ FPPQP
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