Gene Shewmr7_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3090 
Symbol 
ID4256435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3666342 
End bp3666869 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content48% 
IMG OID638123774 
Producthypothetical protein 
Protein accessionYP_739131 
Protein GI114048581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00239332 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.428293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATACA AAAATATCGC CAGTCTGTTT GTCGCCTTGG TCTTAGTCAG CGCCTGCAGC 
AGTAAGCCGA AAAACGATTA CGATCTCAAT TACGACTTTA AGGCATTACA GAGTTTCAGC
CAGCTCGCTC CCCAACCTAG CGACGACCCA CTCAGCGCCC AGCGCATTCA AACCGAAATC
ACCCAACAAT TAAGCCAAAA AGGCTTTACC GAAAATGCCA CTTCCCCCGA TTTTAAAGTC
GCCTATGGGT TATTAACCCA AGATAAACCT AAAGACTCGG GTTTATCCAT AGGTTTAGGC
ACGGGCAGTT CTGGCGGCAT TGGCGTAGGC ACAAGCGTCG GCGTACCACT TGGCAGTGAC
ACGGCAAAAA TTCAAACCAT TCAAATTGAT ATTATCGATA CTAAAACCAA TAAGCTGATT
TGGCGCGGCA CAGATAGTTT CGATTTTGAC GGGGGCGGCG ATAAAAAAGC CCAAGACACA
GCCAAAGCCG TTAGCCGGAT TTTGGCGCAG TTTCCACCGC AGCCATAA
 
Protein sequence
MGYKNIASLF VALVLVSACS SKPKNDYDLN YDFKALQSFS QLAPQPSDDP LSAQRIQTEI 
TQQLSQKGFT ENATSPDFKV AYGLLTQDKP KDSGLSIGLG TGSSGGIGVG TSVGVPLGSD
TAKIQTIQID IIDTKTNKLI WRGTDSFDFD GGGDKKAQDT AKAVSRILAQ FPPQP