| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3072 |
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| Symbol | |
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| ID | 4255907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3648243 |
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| End bp | 3650816 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123753 |
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| Product | ATPase |
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| Protein accession | YP_739113 |
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| Protein GI | 114048563 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0239882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAGCTTGCCA TCTCAGATGC CCAGTCGCTA
GCGCTCGGGC GTGATCATCA GTTTATCGAA CCGTTACATT TGATGATGGC GCTGCTCAAC
CAGGATTCTG GTTCAATCCA TCCTTTATTA ACCCAAGCTG GCATTCGGGT GAGTGCGCTG
CGCTCGCTGT TGAGCCAAGA GCTTGAACGT CTACCGCAGG TCGAAGGCAC TGGCGGCGAT
GTACAATTAT CCCAAGGTTT AATTCGCTTA TTAAACCTGT GCGACAAGTT GGCGCAAAAG
CGCAAAGACA AATATATCTC CAGTGAGTTG TTTGTCTTAG CGGCACTCGA AGGCAGCGAT
GCCTTGGCGC AATGCTTAAA GAAATCAGGC GCCACCAAAG AGCTGCTCGA GCAAACCATT
GAGCAAGTGC GCGGCGGTCA GAATGTGGAT GATCCTAACG CGGAAGATCA ACGCCAAGCG
CTGAAAAAGT TTACCGTCGA TCTCACTGAG CGTGCCGAGC AAGGCAAACT TGACCCTGTG
ATTGGTCGTG ACGATGAAAT CCGCCGCACC ATTCAAGTGC TGCAACGCCG TAGTAAAAAC
AACCCAGTGC TGATTGGTGA GCCAGGCGTG GGTAAAACCG CGATTGTTGA AGGACTCGCT
CAGCGAATTG TGAACGGTGA AGTGCCTGAA GGGATTAAAA ATAAACGCGT TTTATCCTTA
GACATGGGCG CACTGATTGC GGGCGCTAAA TATCGTGGTG AGTTTGAAGA GCGTTTAAAA
GCCGTGCTTA ACGAGCTGGC GCAGGAAGAA GGCCAAGTGA TCCTCTTTAT CGACGAGCTG
CACACTATGG TGGGCGCGGG TAAAGGCGAT GGCGCCATGG ATGCGGGCAA TATGTTAAAG
CCTGCACTGG CCCGTGGCGA TCTTCACTGT GTGGGCGCGA CCACTCTCGA CGAATATCGT
CAATATATTG AAAAGGATGC CGCCCTTGAG CGCCGCTTCC AAAAAGTATT AGTGGATGAG
CCTAGCGTTG AAGACACCAT CGCGATTTTG CGTGGTCTCA AAGAACGCTA CGAGCTGCAT
CACCATGTGG AAATTACCGA TCCGGCAATT GTGGCAGCGG CCACCATGTC GCACCGTTAT
GTGTCGGATC GTAAATTGCC CGATAAAGCC ATCGACTTAA TTGACGAGGC GGCATCGAGC
ATCCGTATGC AGATGGATTC TAAGCCTGAA TCTCTCGACA GATTGGAGCG CCGTGCTATT
CAGTTGAAAC TGGAAGAGCA GGCATTAGCC AAAGAAAACG ATGAGGCGAG CCGCCGTCGA
CTCGAACATT TGCGTGTCGA GTTACATGAA GTTGAGGCTA AGGCGTCGGA GCTTAATGAA
ATCTGGCGCA CCGAAAAAGC GGCGCTTGCA GGGACTCAGC ATATTAAAGC CGACCTTGAG
CAGGCGCGGA TGGATTTAGA AGTGGCGCGC CGCGCAGGCG ACTTGACCCG TATGTCCGAG
CTGCAATATG GCCGTATTCC AGAGCTTGAA AAGCAACTGG ACTTAGCATC GCAAGCCGAA
ATGCAGGATA TGACGCTGCT ACGCAATAAA GTCACTGACT TAGAAATTGC CGAAGTGTTA
TCAAAGGCGA CGGGTATTCC GGTTTCTAAG ATGCTCGAAG GCGAGCGTGA AAAACTGTTG
CAAATGGAAG TGGCACTGCA TGAGCGGGTG ATTGGCCAAA ACGAAGCCGT GGATGCGGTC
GCCAATGCGA TTCGCCGTAG CCGCGCAGGG CTTGCCGATC CGAATCGTCC TATTGGTTCG
TTCCTGTTCT TAGGACCAAC CGGTGTGGGT AAAACTGAGC TGTGTAAGTC GTTGGCTAAG
TTTTTATTCG ATACGGAATC AGCCTTGGTG CGCATCGACA TGTCTGAATT TATGGAGAAA
CACGCGGTTT CCCGTTTAGT GGGGGCGCCT CCAGGCTATG TCGGTTATGA AGAGGGCGGT
TATTTAACCG AAGCGGTGCG TCGTAAGCCT TATTCGGTGA TATTGCTCGA TGAGGTGGAA
AAGGCTCACC CAGACGTGTT CAATATTTTG CTGCAGGTGC TGGATGATGG CCGCTTAACC
GATGGTCAAG GCCGTACCGT CGACTTTAGA AATACGGTGA TCATCATGAC CTCAAACTTA
GGCTCTGACA TTATCCAAGA AGGATTCGGT CACCTAAGTT ACAGCGAAAT GAAGAGCGCG
GTGATGAATG TGGTTACCCA TAGCTTTAGA CCCGAGTTTC TAAACCGGAT CGACGAGTCA
GTGGTATTCC ATCCCTTGGA TGCGGAAAAT ATCAAGCATA TTGCATCTAT CCAAATTGCT
TCATTGCGTA AGCGTTTGGC AGAGAAAGAC TATACGCTGG AGATCACCGA CGAGGCATTA
TCGTTAATCG CCGAAATTGG TTTCGACCCA GTCTATGGCG CAAGACCGCT GAAACGTGCC
TTGCAGCAAG AGATGGAAAA CCCATTAGCG CAAAAATTAC TGCGTGGCGA TTTACTGCCC
GGCAAACCTA TTAAGGTCAG TTGCGCCGGT GGTGAGTTGG TATTCGAGCA ATAA
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| Protein sequence | MRLDRMTNKF QLAISDAQSL ALGRDHQFIE PLHLMMALLN QDSGSIHPLL TQAGIRVSAL
RSLLSQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FVLAALEGSD
ALAQCLKKSG ATKELLEQTI EQVRGGQNVD DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL
DMGALIAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKGD GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH
HHVEITDPAI VAAATMSHRY VSDRKLPDKA IDLIDEAASS IRMQMDSKPE SLDRLERRAI
QLKLEEQALA KENDEASRRR LEHLRVELHE VEAKASELNE IWRTEKAALA GTQHIKADLE
QARMDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTDLEIAEVL
SKATGIPVSK MLEGEREKLL QMEVALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTESALV RIDMSEFMEK HAVSRLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL
GSDIIQEGFG HLSYSEMKSA VMNVVTHSFR PEFLNRIDES VVFHPLDAEN IKHIASIQIA
SLRKRLAEKD YTLEITDEAL SLIAEIGFDP VYGARPLKRA LQQEMENPLA QKLLRGDLLP
GKPIKVSCAG GELVFEQ
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