| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3067 |
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| Symbol | |
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| ID | 4255902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3636926 |
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| End bp | 3638056 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123745 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_739108 |
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| Protein GI | 114048558 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.738311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGTT TACTGGCTTT CTGGGCCGAA ACGGGCATAG CCCATTTTAC TGCGGGGCAA
GTCTTGATGA TGGCCGTGGG CGCCTTGCTG TTATACCTTG CGATAGTGCG TGGCTTTGAG
CCACTGCTAC TGTTACCCAT TGGTTTTGGT GCTGTATTGG CGAATATCCC CAATGCGGGC
TTTACCGAAG AGGGAGGAAT GCTCTATTAC GCCTACCATG TTGGGATTGA AACCGGGGTG
TTTCCGCTGC TGATCTTTAT GGGGGTCGGG GCACTGACAG ATTTTAGTGC GCTGATTGCC
AATCCAAAGA CCTTGCTACT CGGCGCGGCG GCGCAGTTTG GGATTTTCGC GACCTTAATT
GGGGCGATAG CGCTAAATCT AGTACCAGGC TTTGAATTTA CCATGCAGGA TGCCGCTGCC
ATTGCCATCA TCGGTGGCGC GGATGGACCA ACGGCGATTT TCCTTGCCTC TAAGCTTGCA
CCTGAGTTAC TGGGGGCGAT TGCTGTGGCG GCCTATTCCT ATATGGCGCT GGTGCCGATT
ATCCAGCCGC CGATCATGCG TTTACTCACG ACCCAAGCCG AGCGTGAGAT AAAAATGGAG
CAGCTACGGG AGGTGAGCAA AAAGGAAAAG ATTATTTTCC CGCTGATGGT GTTGGGCTTA
ACGATTTTAT TCTTACCCGC AGCGACTCCT CTGGTTGGCA TGTTTTGCCT TGGCAACCTA
ATGCGTGAGT CGGGTGTAGT AGATAGATTA TCGAAAACGG CGCAAAACGA GCTGATTAAT
ATCGTCACGA TTTTCTTAGG CTTGGCCGTC GGTTCTAAAC TTTCTGCGGA TCAGTTCTTG
CGCGTCGAAA CCTTAGGGAT CTTGGTTTTG GGCGCGTTAG CATTCGGCAT TGGTACCGCT
GCAGGGGTGT TGATGGCAAA GCTGATGTGC AAATTAACTG GTGGTAAGGT CAATCCATTA
ATTGGCGCGG CGGGCGTATC TGCTGTGCCA ATGGCGGCAA GGGTGGTGAA TAAGGTGGGA
TTAGAGGCTA ATCACCATAA CTTTTTGCTG ATGCACGCCA TGGGGCCAAA CGTTGCTGGG
GTATTAGGCT CTGCGGTTGC GGCGGGGATT TTACTGGCTG TGCTTGGCTA A
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| Protein sequence | MDGLLAFWAE TGIAHFTAGQ VLMMAVGALL LYLAIVRGFE PLLLLPIGFG AVLANIPNAG
FTEEGGMLYY AYHVGIETGV FPLLIFMGVG ALTDFSALIA NPKTLLLGAA AQFGIFATLI
GAIALNLVPG FEFTMQDAAA IAIIGGADGP TAIFLASKLA PELLGAIAVA AYSYMALVPI
IQPPIMRLLT TQAEREIKME QLREVSKKEK IIFPLMVLGL TILFLPAATP LVGMFCLGNL
MRESGVVDRL SKTAQNELIN IVTIFLGLAV GSKLSADQFL RVETLGILVL GALAFGIGTA
AGVLMAKLMC KLTGGKVNPL IGAAGVSAVP MAARVVNKVG LEANHHNFLL MHAMGPNVAG
VLGSAVAAGI LLAVLG
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