| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3063 |
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| Symbol | |
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| ID | 4257313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3631592 |
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| End bp | 3634441 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123741 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_739104 |
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| Protein GI | 114048554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.354036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAGG GGAATATTTT GAAGAAATGG ATATTAGCGG TCGCAATTTC CGCCGCACTT
GCAGGTTGTG CTACCGAAAC CTCAACGCAA TTACCCGCGG GCGTAAAGTT AATTGAGAAT
GTACAACTGA CGGACTCTGA AGTCGGTATT CCCTTTAAAA AATATCAGCT TGCTAATGGG
TTAACGGTTA TTTTGCATCA AGATCATTCC GATCCCTTAG TGCATGTCGA TGTGACTTAT
CACGTCGGCT CGGCCAGAGA ACTGGCAGGC CGTTCAGGGT TCGCCCATTT ATTCGAACAT
ATGATGTTCC AAGGCTCTGA GCACGTTGCC GATGAGCAAC ATTTTGAGGT GGTAACCGAG
GCGGGAGGCA CGCTGAACGG CTCTACCAAT ACCGACAGAA CCAACTATTT TGAGACAGTT
CCTAGCAACC AGCTCGAAAA AATGCTGTGG CTCGAGTCTG ACCGCATGGG CTTTTTGTTG
CCGGCGCTAA CCCGCGAAAA GTTTGAAGTA CAGCGCGAGA CAGTGAAAAA CGAGCGTGCT
CAACGCATTG ATAATCAACC CTATGGCCGC ATGAGCGAGC GCTTTAATCA GGCGATGTTT
CCGATTGGTC ATCCCTATTC TTGGCCTGTG ATCGGCTGGC CAGAGGATCT TAACCGCGCC
ACAGTGGATG ATGTGAAACA CTTTTTCCAG CGCTGGTACG GTCCGAATAA CGCCACGCTG
ACCATTGGCG GCGATTTTGA TGAACTGCAA GCCTTAGCCT GGGTAAACAA ATACTTTGGC
GAAATCCCCC GCGGCCCCGA GGTTCAACCT GAGCCTAAGA CCTTAGTTAC GCTCGATAAG
ACGCGCTATC TCTCGATGGA AGATAACGTG CATTTACCGC TGATCCGTAT CGGCTTTCCG
ACTGTGTATG CCAGCCATCC CGATGAAGCC GCGCTGGACT TATTAGCCAA TATCCTCGGT
GGCGGTAAAA CCTCACTCGT TTACAAAAAC CTTGTGAAGG ATGGTTATGC CGTACAGGCA
AGCGTGAGCC AACCCTGCCA AGAGTTAGCC TGTCAGATGT CGATTTATGC CTTAGCCAAT
CCGCAAAAAG GAGCGACCTT AACCGAACTT GAACAGCGCA TTCTCGACTC GATTAATGAG
TTTGAGCAGC GCGGCGTTAC CGACGATGAC CTGCAAAAAG TGAAAGTGCA GTTTGAGGCC
GATACCATTT TTGGCCTGCA GAGCGTAAAA GGCAAAGTGT CTATGCTTGC CTTGAATCAA
ACCATGTTTG GTGAGCCGAA TAAGATTGGA GTAGACCTTG CGCGCTACGC CAATGTGACC
AAAGACGATG TGATGCGGGT ATTTAAAAAG TACATCAAAG ACAAGCCTAT GGTGGTGATG
AGTGTGGTAC CGCAGGGAAT GACGGCTTTA GTCGCTCATC CGGATAACTT CACCCCTCAA
ACCTTGCCCG TGGCGGATAC GGCTGTAGAG GGGGATTTAC CCGTCGCTAA GTTGGTGTCA
AGTTTCGACC GCTCAACAAT GCCAGCCTCG GGCGCGGCGC CCGTGCTTAA AGTCCCGACA
ATTTGGACGA CTAAGTTAGC CAATGGTATC GAAGTGATGG GCACTCAAAG CAGCGAAACC
CCGACTGTGG AGTTAGTGAT TTATCTTAAC GGCGGACACA GATTAGTGCC CGTTGAAAAG
GCGGGCCTGG CAAGCTTAAC CGCTGAGATG CTGAATGAGT CGACTCAAAA GCGCTCAACA
GAGCAATTGT CGCAGGCGCT TGAGATGCTC GGCAGTACGG TGGACTTTAG TGCCTCCGAA
TCCCAAAGCA CGATTAAGGT GTCGGCGCTC ACCGAGCACT TGGATGAAAC CTTAGCCATA
TTGGAAGAAA AGCTGTTCCA GCCTGCGTTT AACGACGCCG ACTTTGCTCG GGTGAAGCAG
CAACAATTGC AGCAAATTCA GCATATGCAG TCAGACCCTG GCTATGTCGC TAACTCTGCG
CTGTATAGCT TGCTCTATGG TAAGAATAAC GCTCAAGGCG TCAGCGATGC AGGGACCTTA
GATTCCGTTG TCGCGCTGAC ACTTGCGGAT GTGAAGGCGT TTTACGCCGA GCAGTACCGT
GGTGCAAACG CTAAAATCAT TACGGTAGCG AATCTGCCTG AAAGTGCATT GCTACCCAAA
CTTGCGGGAT TGAGCCAATG GCAAGGGGAG GCGAGTGCAT TACCGCCACT TAAATCATTC
CCTGCGCTGA AGGGCGGGAC TATCTATCTG ATCGATAAAC CGGGCGCTGC TCAGTCGGTG
ATTAACATTG CGAAACGTGC CTTACCCTAT GATGCAACGG GTAATTATTT TAAATCTTAC
CTGATGAACT ATCCGCTCGG TGGCGCCTTC AATAGCCGTA TTAACCTCAA CCTACGTGAA
AACAAGGGGT ATACCTATGG GGCTCGCAGC TCATTTACCG GTGGCGTCGA AGTCGGTGAT
TTTGTGGCCT CGAGTGATGT GCGTACCGAT GTGACCGCCA AGGCGGTAAA TGAATTTATC
AAAGAGATCA AAGCCTATCA GCAAAATGGG ATGACAGACA CTGAGCTCGG CTTTATGCGT
AACTCGGTTT CCCAAGGGCA AGCATTGGAT TATGAGACGC CTTATCAGAA GGCGGGCTTT
ATGCGGATGA TCCAGCGTTA CCAGCTGAGC CAAGATTTTA CTACCGAGCA GGACAAAATT
ATAAATACTG TAACAAAAGA TGAACTCAAT GCCCTCGCGG CTTCCGAGCT AGATATCTCG
AAAATGATCA TCTTAGTGGT GGGAGATAAG GCGAAAATTG AAGCGGATTT AGCAACTTTA
GGCTATCCAA TTGAAACTTT AGTATTGTAA
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| Protein sequence | MYKGNILKKW ILAVAISAAL AGCATETSTQ LPAGVKLIEN VQLTDSEVGI PFKKYQLANG
LTVILHQDHS DPLVHVDVTY HVGSARELAG RSGFAHLFEH MMFQGSEHVA DEQHFEVVTE
AGGTLNGSTN TDRTNYFETV PSNQLEKMLW LESDRMGFLL PALTREKFEV QRETVKNERA
QRIDNQPYGR MSERFNQAMF PIGHPYSWPV IGWPEDLNRA TVDDVKHFFQ RWYGPNNATL
TIGGDFDELQ ALAWVNKYFG EIPRGPEVQP EPKTLVTLDK TRYLSMEDNV HLPLIRIGFP
TVYASHPDEA ALDLLANILG GGKTSLVYKN LVKDGYAVQA SVSQPCQELA CQMSIYALAN
PQKGATLTEL EQRILDSINE FEQRGVTDDD LQKVKVQFEA DTIFGLQSVK GKVSMLALNQ
TMFGEPNKIG VDLARYANVT KDDVMRVFKK YIKDKPMVVM SVVPQGMTAL VAHPDNFTPQ
TLPVADTAVE GDLPVAKLVS SFDRSTMPAS GAAPVLKVPT IWTTKLANGI EVMGTQSSET
PTVELVIYLN GGHRLVPVEK AGLASLTAEM LNESTQKRST EQLSQALEML GSTVDFSASE
SQSTIKVSAL TEHLDETLAI LEEKLFQPAF NDADFARVKQ QQLQQIQHMQ SDPGYVANSA
LYSLLYGKNN AQGVSDAGTL DSVVALTLAD VKAFYAEQYR GANAKIITVA NLPESALLPK
LAGLSQWQGE ASALPPLKSF PALKGGTIYL IDKPGAAQSV INIAKRALPY DATGNYFKSY
LMNYPLGGAF NSRINLNLRE NKGYTYGARS SFTGGVEVGD FVASSDVRTD VTAKAVNEFI
KEIKAYQQNG MTDTELGFMR NSVSQGQALD YETPYQKAGF MRMIQRYQLS QDFTTEQDKI
INTVTKDELN ALAASELDIS KMIILVVGDK AKIEADLATL GYPIETLVL
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