| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3062 |
|---|
| Symbol | |
|---|
| ID | 4257312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3629759 |
|---|
| End bp | 3631408 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638123740 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_739103 |
|---|
| Protein GI | 114048553 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.502221 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGATA AGCCTCAAAA TAAAGGTCTG ACTGTTAACC TTGTCGCGAT AGCGAATCAC
CAATCAGAGA AGCGCAAATT GAAGCCATTC AATGAATTAG TACAACATTT CTCGGACGCT
CAAGGGCGTG CCGCACTCCT TGGCATGTTA CGTGGAATTG AGCGTGAAGC GCTGCGTATC
GACGAGTCAG GCTACCTTGC GTTAGATGGT CATCCATTAG AGCTTGGCTC GGCATTAACG
CATTCGCGCA TTACGACAGA TTACAGTGAA GCACTGCTTG AATTTATCAC GCCGGTAAAC
AATCACGTAG GTCCCCTATT GCAAGGACTC ACCGAGACTC ATGCCTTTAG CGTGCGTCAT
TTGCATGGTC AGCGCCTGTG GCCCGTGAGC ATGCCATGTT ACGTGAAGGA TGAGCAGAAT
ATTCCGGTCG CCCGTTATGG CAGCTCTAAC ACGGGCAAGA TGAAAACCTT GTATCGCAAG
GGCTTAACCT ACCGTTATGG CGCTCTGATG CAGATCATCT CTGGAGTGCA TTTTAACTTC
TCTGTATCGC AGGAACTGTG GCAAAGCCTC TATGAGTTGA GTGACAAAAG CGTGAGCTTT
GAGGATTTTA TCTCCGAATC TTACTTTGGC CTCATTCGCA ATTACCGCCG TTTAGTCTGG
GTGTTACCTT ATCTGTTTGG CGCATCACCT GCGCTGTGTA GCTCGTTTAT CAAGGGGCAG
AAGACCGATT TACGCTTTGA AAAATCGGGT CGCGGTACCT TGTATTTACC CTATGCGACT
TCACTGCGGA TGAGCGATCT GGGTTACACC AATAAAGAGC AGGAAGATCT CAATATCAGC
TATAACTCCC TGCCTGAGTA TCTGGCTGGG GTCAGAGCCG CGATTAAGAT GCCATCGGCC
AACTTTGCCA ATATCGGGGT GAAGGTGGAT GGTGAATATC GCCAGCTCAA TGCCAATGTG
CTGCAAATTG AAAACGAATT TTACTCGCCT ATTCGTGCTA AGCGCGTCAC GAAAAGCGGT
GAGAAGCCCT CTGAAGCCCT TGCCCGTGCG GGGGTTGAAT ATATTGAGGT ACGTGCATTA
GATGTAAACC CCTTCAGCCC GATTGGGATT GAAGAGAACC AAGTGCGTTT TCTCGACTTG
TTCTTACTCT ATTGCTTATT AACCGAGTCG CCTAAGTCCG ATGCGGCAGA AGAAGCCCGT
TTAAGTGCTA ACTTAAAATC TGTTGTGCTT GAAGGCCGTA AGCCAGGGCT CGAGTTATTA
ACAGAGACAG GTACACGCTC ACTGCAAACG TGGCTTTTGG ATCTGTTTAA GCATTTGGAT
TCATTGGCTA AGTTACTCGA TGGCGATAAA CAGGAGTACC AAACGGCCTT AGCCCATTGG
CGTGAAGCCG TGAATGACCC ACAAAAGACC TTGTCTGGGC AAGTTATCCA GCAATTAATC
ACCAAAGGCC AAGACCATGG ACAATGGGTG ATGTCACTGG CGCAGCAATA TCACCAATAT
TTTATGGATT ACCCCTTATC AGCCGAGGTT GTCAGCGATT ATCAAGCCGA GGCGCAAGCA
TCGCTTAATA AGCAAGCAGA CATCGAAGCG GCGCAAAGTG CGGTATCCTT TGATGATTAT
CTGACGGATT ATTTCGGGAC TTCATCCTAA
|
|---|
| Protein sequence | MKDKPQNKGL TVNLVAIANH QSEKRKLKPF NELVQHFSDA QGRAALLGML RGIEREALRI
DESGYLALDG HPLELGSALT HSRITTDYSE ALLEFITPVN NHVGPLLQGL TETHAFSVRH
LHGQRLWPVS MPCYVKDEQN IPVARYGSSN TGKMKTLYRK GLTYRYGALM QIISGVHFNF
SVSQELWQSL YELSDKSVSF EDFISESYFG LIRNYRRLVW VLPYLFGASP ALCSSFIKGQ
KTDLRFEKSG RGTLYLPYAT SLRMSDLGYT NKEQEDLNIS YNSLPEYLAG VRAAIKMPSA
NFANIGVKVD GEYRQLNANV LQIENEFYSP IRAKRVTKSG EKPSEALARA GVEYIEVRAL
DVNPFSPIGI EENQVRFLDL FLLYCLLTES PKSDAAEEAR LSANLKSVVL EGRKPGLELL
TETGTRSLQT WLLDLFKHLD SLAKLLDGDK QEYQTALAHW REAVNDPQKT LSGQVIQQLI
TKGQDHGQWV MSLAQQYHQY FMDYPLSAEV VSDYQAEAQA SLNKQADIEA AQSAVSFDDY
LTDYFGTSS
|
|---|
| |