Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3052 |
Symbol | |
ID | 4257302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3619205 |
End bp | 3619741 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638123730 |
Product | hemerythrin HHE cation binding domain-containing protein |
Protein accession | YP_739093 |
Protein GI | 114048543 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0120617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.148457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAAA GACTCATGCA TGATCACAAA CATATAGCAG TGTTATTGAA TGTCTTGAAA AACAAGCAGA TGAAATTAGC TGAAGGCGAA GCTATTAATT TTATCGTGGT TCGGGACATA GTCGAGTATA TGCAAGGATA TGCTGAGCAT AGTCATCATC CTGTTGAAGA CATTATTTAT GCTTACTATT TGGCGCATAA GGCGAATGAT GAAGTTGACA AGCTTAGCGC AGAGCATCAA ATGGTTACTG CAGCCTCCTC GGCATTGATG AATACTTTGA ATCTTATCTT GAGTGACATA GTCGTTGCGA GGGATAAGTT AGTCATCGAT TTTGCCGAAT ACATTGAGCT ACAAGAAAAG CACATGCAAA TGGAAGAGCG GGAGATTTTC CCGTTACTGG CTAAAACCTT AACCGACAAA GATTGGCTGG TTATTGAGCA GCAATGCCAA GCATCTTTAA TCGATGATCC GTTATTCCTC GACCGCGAGC AACAGGCCTT TGATGAGCTG CGCTCTTACC TCAGGACAGC CGAATAG
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Protein sequence | MLKRLMHDHK HIAVLLNVLK NKQMKLAEGE AINFIVVRDI VEYMQGYAEH SHHPVEDIIY AYYLAHKAND EVDKLSAEHQ MVTAASSALM NTLNLILSDI VVARDKLVID FAEYIELQEK HMQMEEREIF PLLAKTLTDK DWLVIEQQCQ ASLIDDPLFL DREQQAFDEL RSYLRTAE
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