Gene Shewmr7_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3052 
Symbol 
ID4257302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3619205 
End bp3619741 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID638123730 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_739093 
Protein GI114048543 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.148457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA GACTCATGCA TGATCACAAA CATATAGCAG TGTTATTGAA TGTCTTGAAA 
AACAAGCAGA TGAAATTAGC TGAAGGCGAA GCTATTAATT TTATCGTGGT TCGGGACATA
GTCGAGTATA TGCAAGGATA TGCTGAGCAT AGTCATCATC CTGTTGAAGA CATTATTTAT
GCTTACTATT TGGCGCATAA GGCGAATGAT GAAGTTGACA AGCTTAGCGC AGAGCATCAA
ATGGTTACTG CAGCCTCCTC GGCATTGATG AATACTTTGA ATCTTATCTT GAGTGACATA
GTCGTTGCGA GGGATAAGTT AGTCATCGAT TTTGCCGAAT ACATTGAGCT ACAAGAAAAG
CACATGCAAA TGGAAGAGCG GGAGATTTTC CCGTTACTGG CTAAAACCTT AACCGACAAA
GATTGGCTGG TTATTGAGCA GCAATGCCAA GCATCTTTAA TCGATGATCC GTTATTCCTC
GACCGCGAGC AACAGGCCTT TGATGAGCTG CGCTCTTACC TCAGGACAGC CGAATAG
 
Protein sequence
MLKRLMHDHK HIAVLLNVLK NKQMKLAEGE AINFIVVRDI VEYMQGYAEH SHHPVEDIIY 
AYYLAHKAND EVDKLSAEHQ MVTAASSALM NTLNLILSDI VVARDKLVID FAEYIELQEK
HMQMEEREIF PLLAKTLTDK DWLVIEQQCQ ASLIDDPLFL DREQQAFDEL RSYLRTAE