Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3049 |
Symbol | |
ID | 4257299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3616121 |
End bp | 3617077 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123727 |
Product | transaldolase B |
Protein accession | YP_739090 |
Protein GI | 114048540 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00546599 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.166064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA CATTAGAGCA ACTCAAGTCA TACACTACGA TTGTGGCCGA TACTGGCGAT ATTGAAGCGA TCAAACGCTA TCAGCCAGAA GACGCAACGA CCAACCCATC ACTCATTTTA AAAGCGGCTC AAATTCCCGA GTATAGCGCT CTAATCGACA ATGCTATCGC ATGGGCTAAA TTACAAAGTG CTGATATTGA GCAACAGATT GATGATGCCA GCGATAAACT TGCAGTGAAC ATTGGTGTCG AGATCCTAAA ACTGGTCCCA GGCCGTATTT CGACCGAAGT GGATGCCCGC TTATCCTTCG ATAAAGAAAA ATCCATTGCC AAAGCGCATA AGCTAGTACG TCTGTACCAA GAAGCGGGCG TGGATAAATC TCGCATTCTG ATTAAATTAG CCTCAACTTG GGAAGGCATT TGTGCCGCCA AAGAGTTAGA GCAAGAAGGT ATCAACTGTA ACTTAACTCT ACTATTTAGC TTCGCTCAAG CACGTGCCTG TGCAGAAGCG GGCGTGTACT TAATTTCTCC ATTCGTTGGT CGCATACTCG ACTGGTACAA AAAAGACACA GGTAAAGACT ATGACGCAGT AAATGACCCG GGTGTTGTTT CTGTGACTGA AATTTACAAT TACTACAAAC AGCATGGCTA TAACACAGTA GTCATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AATTAGCAGG CTGTGATCGC CTGACTATTG GCCCTTCATT ACTCGAAGAG CTGGCAAACT CTCAAGTTGC TATTCAACCT AAACTCATTC CTGCCAGCAC CACAGTTGCT GCCGGTGAGC CGTTAACCGA AGCGCAATTC CGCTGGGACT TCAACCAAGA TCCTATGGCT GTCGACAAGT TAGCAGAAGG TATCCGTAAC TTCGCCATCG ACCAAGGCAA ACTCGAAGTC ATGCTCAAGG CAAAACTGGC AAACTAA
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Protein sequence | MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYSA LIDNAIAWAK LQSADIEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ EAGVDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR LTIGPSLLEE LANSQVAIQP KLIPASTTVA AGEPLTEAQF RWDFNQDPMA VDKLAEGIRN FAIDQGKLEV MLKAKLAN
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